STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
EFH90174.1acetoacetyl-CoA synthase; COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR000873:IPR005914:IPR020845; KEGG: gwc:GWCH70_1970 acetoacetyl-CoA synthase; PFAM: AMP-dependent synthetase and ligase; SPTR: C5D2Q9 Acetoacetyl-CoA synthase; TIGRFAM: acetoacetyl-CoA synthase; PFAM: AMP-binding enzyme; TIGRFAM: acetoacetyl-CoA synthase. (667 aa)    
Predicted Functional Partners:
EFH90570.1
COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterProIPR016040:IPR008927:IPR013328:IPR006176:IPR 006108:IPR001753; KEGG: chy:CHY_1609 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/isomerase family protein; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; Enoyl-CoA hydratase/isomerase; SPTR: Q3ABP7 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/isomerase family protein; PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
 
 
 0.930
Krac_6972
Amino acid adenylation domain protein; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR010071:IPR009081:IPR006162:IPR020845:IPR 001242:IPR000873:IPR006163:IPR001031; KEGG: ava:Ava_1611 amino acid adenylation; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Thioesterase; SPTR: Q3MCQ2 Amino acid adenylation; TIGRFAM: amino acid adenylation domain protein; PFAM: Thioesterase domain; Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain.
  
 0.920
EFH90118.1
COGs: COG3321 Polyketide synthase modules and related protein; InterProIPR016038:IPR001227:IPR000873:IPR006163:IPR 014030:IPR014031:IPR014043:IPR016039:IPR016035:IPR009081:I PR016036:IPR006162:IPR020845:IPR018201; KEGG: ava:Ava_4108 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase; AMP-dependent synthetase and ligase; phosphopantetheine-binding; Acyl transferase; SPTR: Q3M5M8 Beta-ketoacyl synthase; PFAM: Acyl transferase domain; Phosphopantetheine attachment site; Beta-ketoacyl synthase, N-terminal domain; AMP-binding enzyme; Beta-ketoacyl synthase, C-terminal domain.
  
 0.917
Krac_6815
Pyruvate carboxyltransferase; COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891:IPR013785; KEGG: gyc:GYMC61_2443 pyruvate carboxyltransferase; PFAM: pyruvate carboxyltransferase; SPTR: C9RSF1 Pyruvate carboxyltransferase; PFAM: HMGL-like.
 
 0.868
EFH88919.1
Amino acid adenylation domain protein; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR010071:IPR006162:IPR020845:IPR001242:IPR 000873:IPR006163:IPR009081:IPR020459; KEGG: npu:Npun_F2181 amino acid adenylation domain-containing protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; SPTR: Q9RAH1 NosD; TIGRFAM: amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain.
  
 
 0.854
Krac_6794
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR002869:IPR009014:IPR019752:IPR015941:IPR 002880; KEGG: chl:Chy400_1038 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; SPTR: B9LLV4 Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; PFAM: domain; Pyruvate ferredoxin/flavodoxin oxidoreductase.
  
 
 0.837
Krac_6763
Propanoyl-CoA C-acyltransferase; COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR016039:IPR018483:IPR002155; KEGG: pol:Bpro_5255 thiolase; PRIAM: Propanoyl-CoA C-acyltransferase; SPTR: Q120C8 Thiolase; PFAM: Thiolase, C-terminal domain.
  
 
 0.810
Krac_7768
Biotin/lipoyl attachment domain-containing protein; COGs: COG0511 Biotin carboxyl carrier protein; InterPro IPR011053:IPR000089; KEGG: dau:Daud_1015 pyruvate carboxylase subunit B; PFAM: biotin/lipoyl attachment domain-containing protein; SPTR: B1I3L5 Acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein.
    
 0.798
Krac_0469
COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterProIPR016040:IPR013328:IPR006176:IPR006108:IPR 008927; KEGG: hau:Haur_1203 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; PRIAM: 3-hydroxybutyryl-CoA dehydrogenase; SPTR: A9B0Y1 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
  
 
 0.794
EFH90335.1
COGs: COG2225 Malate synthase; InterPro IPR011076:IPR015813:IPR019830:IPR006252; KEGG: aac:Aaci_2530 malate synthase A; PFAM: Malate synthase family protein; PRIAM: Malate synthase; SPTR: C8WT20 Malate synthase A; TIGRFAM: malate synthase A; PFAM: Malate synthase; TIGRFAM: malate synthase A; Belongs to the malate synthase family.
   
 0.761
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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