STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFH90248.1KEGG: cag:Cagg_2432 hypothetical protein; SPTR: B8G3D2 Putative uncharacterized protein. (133 aa)    
Predicted Functional Partners:
EFH90249.1
Protein of unknown function DUF2089; COGs: COG3877 conserved hypothetical protein; InterPro IPR018658; KEGG: chl:Chy400_1099 hypothetical protein; PFAM: Protein of unknown function DUF2089; SPTR: B9LAH4 Putative uncharacterized protein; PFAM: Protein of unknown function(DUF2089).
       0.805
EFH90247.1
KEGG: chl:Chy400_1101 hypothetical protein; SPTR: B9LAH6 Putative uncharacterized protein.
       0.764
Krac_6827
Competence/damage-inducible protein CinA; COGs: COG1058 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; InterPro IPR008135:IPR008136:IPR001453; KEGG: mta:Moth_0735 competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; SPTR: Q2RKI6 Putative competence-damage inducible protein; TIGRFAM: competence/damage-inducible protein CinA; PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-ter [...]
    
 0.683
Krac_0189
Cytidyltransferase-related domain protein; COGs: COG3172 ATPase/kinase involved in NAD metabolism; InterPro IPR004821:IPR014729:IPR016429; KEGG: mbt:JTY_0218 putative transcriptional regulatory protein; SPTR: Q7U2K1 POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN NADR (PROBABLY ASNC-FAMILY); TIGRFAM: cytidyltransferase-related domain protein; TIGRFAM: nicotinamide-nucleotide adenylyltransferase, NadR type; cytidyltransferase-related domain.
   
 
  0.608
Krac_3009
Hypothetical protein; KEGG: gym:GYMC10_6274 cytidyltransferase-related domain protein; SPTR: A6G9I1 Putative uncharacterized protein.
   
 
  0.608
EFH90250.1
IS630 family transposase; InterPro IPR009057; KEGG: rxy:Rxyl_3067 IS630 family transposase; SPTR: Q1AYN4 Putative uncharacterized protein.
       0.509
EFH90251.1
KEGG: rxy:Rxyl_3068 hypothetical protein; SPTR: Q1ARK2 Putative uncharacterized protein.
       0.509
Krac_6535
Response regulator receiver protein; InterPro IPR011006:IPR001789; KEGG: cyc:PCC7424_2845 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; SPTR: Q2BLA3 Sensor protein; PFAM: Response regulator receiver domain.
    
  0.421
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.