STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFH90436.1Hypothetical protein; KEGG: ppf:Pput_3337 spore coat U domain-containing protein; SPTR: A5W5Q3 Spore coat U domain protein; manually curated. (79 aa)    
Predicted Functional Partners:
EFH90435.1
KEGG: bra:BRADO2295 hypothetical protein; SPTR: A4YQF2 Putative uncharacterized protein.
       0.773
EFH90434.1
KEGG: bbt:BBta_3276 hypothetical protein; SPTR: A3X090 Putative uncharacterized protein.
       0.746
EFH90437.1
Histidine kinase; COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterPro IPR009082:IPR003594:IPR005467:IPR003661; KEGG: afw:Anae109_1854 histidine kinase; PFAM: histidine kinase A domain protein; SMART: histidine kinase A domain protein; SPTR: A7HBG1 Sensor protein; PFAM: His Kinase A (phosphoacceptor) domain.
       0.433
EFH90433.1
COGs: COG0515 Serine/threonine protein kinase; InterProIPR011009:IPR000719:IPR017441:IPR008271:IPR 017442:IPR001828:IPR020635:IPR002290; KEGG: hau:Haur_0990 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; Extracellular ligand-binding receptor; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; SPTR: A9AZ92 Serine/threonine protein kinase; PFAM: Protein kinase domain; Receptor family ligand binding region.
       0.401
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.