STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFH90622.1KEGG: deb:DehaBAV1_0084 hypothetical protein; SPTR: A5FSZ6 Putative uncharacterized protein. (549 aa)    
Predicted Functional Partners:
EFH90623.1
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR011010:IPR010998:IPR013762:IPR002104; KEGG: det:DET0905 phage integrase family site specific recombinase; PFAM: integrase family protein; SPTR: Q3Z9Q6 Site-specific recombinase, phage integrase family; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
       0.752
EFH90620.1
Zinc finger CHC2-family protein; InterPro IPR002694; KEGG: bra:BRADO5844 hypothetical protein; PFAM: zinc finger CHC2-family protein; SPTR: A4Z032 Putative uncharacterized protein; PFAM: CHC2 zinc finger.
       0.495
EFH90621.1
KEGG: bra:BRADO2874 hypothetical protein; SPTR: B5JI09 Putative uncharacterized protein; PFAM: Protein of unknown function, DUF488.
       0.495
EFH90624.1
KEGG: gka:GK3145 hypothetical protein; SPTR: Q5KV56 Putative uncharacterized protein GK3145.
       0.411
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.