STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFH90764.1KEGG: hypothetical protein; SPTR: B9QM85 Putative uncharacterized protein. (200 aa)    
Predicted Functional Partners:
EFH90763.1
Hypothetical protein; KEGG: maa:MAG_2930 F0F1 ATP synthase subunit alpha.
       0.701
EFH90761.1
KEGG: amr:AM1_B0377 hypothetical protein; SPTR: B4WUJ6 Putative uncharacterized protein.
       0.536
EFH90762.1
RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR014284:IPR007627:IPR013249:IPR013325:IPR 013324; KEGG: drm:Dred_2286 ECF subfamily RNA polymerase sigma-24 factor; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; SPTR: A4J6U3 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.
       0.536
EFH90765.1
KEGG: hypothetical protein; SPTR: B0WZP8 F-box and wd40 domain protein 7.
       0.459
EFH90760.1
KEGG: xac:XAC1509 hypothetical protein; SPTR: B6G818 Putative uncharacterized protein.
       0.414
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.