STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
Krac_1316InterPro IPR001789:IPR011006; KEGG: cyb:CYB_1937 response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: B9XIN4 Response regulator receiver protein; PFAM: Response regulator receiver domain. (135 aa)    
Predicted Functional Partners:
Krac_4527
PAS/PAC sensor signal transduction histidine kinase; COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterProIPR005467:IPR000014:IPR000700:IPR003594:IPR 009082:IPR001610:IPR003661:IPR004358:IPR013767:IPR013655; KEGG: phe:Phep_3913 PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: A6EDD2 Sensor protein; TIGRFAM: PAS sensor pr [...]
 
 0.998
EFH88736.1
Signal transduction histidine kinase with CheB and CheR activity; COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterProIPR000673:IPR000780:IPR013656:IPR003661:IPR 003594:IPR005467:IPR009082:IPR002052; KEGG: ava:Ava_0314 signal transduction histidine kinase (STHK) with CheB and CheR activity; PFAM: ATP-binding region ATPase domain protein; CheB methylesterase; MCP methyltransferase CheR-type; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: MCP methyltransferase CheR-type; histidine kinase A domain protein; ATP-binding region ATPase domain protein; [...]
  
 0.997
EFH88743.1
Signal transduction histidine kinase with CheB and CheR activity; COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterProIPR000673:IPR000780:IPR013656:IPR003661:IPR 003594:IPR005467:IPR009082; KEGG: ava:Ava_0314 signal transduction histidine kinase (STHK) with CheB and CheR activity; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; CheB methylesterase; MCP methyltransferase CheR-type; PAS fold-4 domain protein; SMART: MCP methyltransferase CheR-type; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SPTR: Q3M [...]
  
 0.997
Krac_8832
COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR011006; KEGG: mxa:MXAN_4640 sensor histidine kinase/response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Q1D3G7 Sensor protein; PFAM: Response regulator receiver domain.
 
 0.997
Krac_4981
COGs: COG5002 Signal transduction histidine kinase; InterProIPR003594:IPR009082:IPR005467:IPR000014:IPR 000700:IPR004358:IPR001610:IPR003661:IPR013767:IPR013656; KEGG: cyc:PCC7424_4549 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: B7KAD8 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine k [...]
 
 0.984
Krac_9928
COGs: COG5002 Signal transduction histidine kinase; InterProIPR003594:IPR009082:IPR005467:IPR000014:IPR 000700:IPR001610:IPR003661:IPR004358:IPR013767:IPR013656; KEGG: ttr:Tter_2374 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: D1CHQ0 Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS s [...]
  
 0.981
Krac_0404
COGs: COG0642 Signal transduction histidine kinase; InterProIPR004358:IPR003594:IPR000014:IPR001610:IPR 003661:IPR005467:IPR000700:IPR013655:IPR009082; KEGG: mxa:MXAN_6734 response regulator/sensory box histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: Q1CXM2 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like AT [...]
 
 0.968
Krac_5390
COGs: COG5002 Signal transduction histidine kinase; InterProIPR005467:IPR000014:IPR000700:IPR001610:IPR 003661:IPR003594:IPR009082:IPR013767:IPR013655:IPR013656:I PR004358; KEGG: npu:Npun_F6350 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: B2IX87 Sensor protein; TIGRFAM: PAS sensor p [...]
 
 0.966
Krac_0556
COGs: COG0642 Signal transduction histidine kinase; InterProIPR004358:IPR003594:IPR000014:IPR001610:IPR 003661:IPR005467:IPR000700:IPR013767:IPR013655:IPR009082; KEGG: npu:Npun_R4211 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: B2J8U8 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA g [...]
 
 0.963
Krac_6498
COGs: COG5002 Signal transduction histidine kinase; InterProIPR003594:IPR009082:IPR005467:IPR000014:IPR 000700:IPR004358:IPR013767:IPR013656:IPR013655:IPR003661:I PR001610; KEGG: npu:Npun_R4211 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: C8SDN7 PAS/PAC sensor signal transduction hi [...]
 
 0.962
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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