STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_1580ABC transporter related protein; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: tro:trd_0224 putative ABC superfamily (atp&memb) transport protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B9KXN7 Putative ABC superfamily (Atp&memb) transport protein; PFAM: ABC transporter. (255 aa)    
Predicted Functional Partners:
Krac_3197
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: gbm:Gbem_2201 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: C6MV21 Putative uncharacterized protein; PFAM: Predicted permease.
 
  0.974
Krac_5614
Protein of unknown function DUF214; InterPro IPR003838; KEGG: mlo:mlr4464 ABC transporter integral membrane protein; PFAM: protein of unknown function DUF214; SPTR: Q98E04 ABC transporter integral membrane protein; PFAM: Predicted permease.
  
 0.969
Krac_4968
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: sti:Sthe_1776 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: D1C4P3 Putative uncharacterized protein; PFAM: Predicted permease.
  
  0.812
Krac_1851
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: sti:Sthe_0963 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: D1C2D2 Putative uncharacterized protein; PFAM: Predicted permease.
  
  0.779
Krac_5246
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: sti:Sthe_1776 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: D1C4P3 Putative uncharacterized protein; PFAM: Predicted permease.
  
  0.777
Krac_1581
KEGG: sti:Sthe_0963 protein of unknown function DUF214; SPTR: D1C2D2 Putative uncharacterized protein.
       0.773
Krac_2606
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: sti:Sthe_1776 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: D1C4P3 Putative uncharacterized protein; PFAM: Predicted permease.
  
  0.762
Krac_4310
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: sti:Sthe_1776 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: D1C4P3 Putative uncharacterized protein; PFAM: Predicted permease.
  
  0.745
Krac_6307
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: sti:Sthe_0963 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: D1C2D2 Putative uncharacterized protein; PFAM: Predicted permease.
  
  0.711
Krac_7308
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: rrs:RoseRS_1075 hypothetical protein; PFAM: protein of unknown function DUF214; SPTR: A5US81 Putative uncharacterized protein; PFAM: Predicted permease.
  
  0.663
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.