STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_1815Peptidoglycan-binding lysin domain protein; InterPro IPR018392:IPR002482; KEGG: cbo:CBO2337 hypothetical protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: A5I4A7 Hypothetical phage protein; PFAM: LysM domain. (186 aa)    
Predicted Functional Partners:
Krac_5965
COGs: COG3497 Phage tail sheath protein FI; InterPro IPR007067; KEGG: nha:Nham_0832 phage tail sheath protein; PFAM: tail sheath protein; SPTR: B9Z3L7 Tail sheath protein; PFAM: Phage tail sheath protein.
  
 
 0.979
Krac_5979
KEGG: scl:sce2097 hypothetical protein; SPTR: A9FVB0 Hypothetical protein; PFAM: Gene 25-like lysozyme.
  
   0.976
Krac_5966
InterPro IPR011747; KEGG: scl:sce2086 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: A9FV76 Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein; PFAM: T4-like virus tail tube protein gp19; TIGRFAM: conserved hypothetical phage tail region protein.
  
   0.969
Krac_5980
InterPro IPR011749; KEGG: bra:BRADO4377 hypothetical protein; SPTR: A4YW45 Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein, phage tail-like region.
  
 
 0.956
Krac_5976
KEGG: scl:sce2094 hypothetical protein; SPTR: A9FVA2 Putative uncharacterized protein.
  
   0.940
EFH90656.1
KEGG: hypothetical protein; SPTR: C3ZE54 Putative uncharacterized protein; PFAM: Baseplate J-like protein; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type.
  
 
 0.846
Krac_6827
Competence/damage-inducible protein CinA; COGs: COG1058 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; InterPro IPR008135:IPR008136:IPR001453; KEGG: mta:Moth_0735 competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; SPTR: Q2RKI6 Putative competence-damage inducible protein; TIGRFAM: competence/damage-inducible protein CinA; PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-ter [...]
    
  0.756
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
    
  0.752
EFH90325.1
InterPro IPR007831; KEGG: pjd:Pjdr2_2098 type II secretion system protein E; PFAM: General secretory system II protein E domain protein; SPTR: A6C1Z3 Type IV fimbrial assembly protein PilB; PFAM: GSPII_E N-terminal domain.
    
   0.591
Krac_8996
Trehalose-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
  
  
 0.579
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.