STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_1937Transposase IS204/IS1001/IS1096/IS1165 family protein; COGs: COG3464 Transposase and inactivated derivatives; InterPro IPR002560; KEGG: amr:AM1_3220 transposase; PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; SPTR: A6C7W7 Transposase; PFAM: Transposase. (283 aa)    
Predicted Functional Partners:
Krac_1648
Transposase; COGs: COG3464 Transposase and inactivated derivatives; InterPro IPR017894; KEGG: cyn:Cyan7425_0088 transposase IS204/IS1001/IS1096/IS1165 family protein; SPTR: B8HZA2 Transposase IS204/IS1001/IS1096/IS1165 family protein.
 
     0.805
EFH88689.1
Transposase; COGs: COG3464 Transposase and inactivated derivatives; KEGG: csc:Csac_2714 transposase, IS204/IS1001/IS1096/IS1165 family protein; SPTR: A4XMZ8 Transposase, IS204/IS1001/IS1096/IS1165 family protein.
  
     0.775
EFH88909.1
Response regulator receiver protein; InterPro IPR017894; KEGG: hau:Haur_5033 transposase IS204/IS1001/IS1096/IS1165 family protein; SPTR: A9B8J9 Transposase IS204/IS1001/IS1096/IS1165 family protein.
  
     0.775
Krac_6069
Transposase; COGs: COG3464 Transposase and inactivated derivatives; KEGG: ana:alr8016 transposase; SPTR: Q8YKA0 Transposase.
 
     0.775
Krac_0787
Transposase IS204/IS1001/IS1096/IS1165 family protein; COGs: COG3464 Transposase and inactivated derivatives; InterPro IPR002560; KEGG: drm:Dred_0866 transposase, IS204/IS1001/IS1096/IS1165 family protein; PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; SPTR: Q93CQ1 Transposase TnpA; PFAM: Transposase.
  
     0.762
Krac_7449
Resolvase domain protein; COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR006119:IPR011109; KEGG: amt:Amet_4291 resolvase domain-containing protein; PFAM: Resolvase domain; Recombinase; SPTR: B2JY29 Resolvase domain protein; PFAM: Recombinase; Resolvase, N terminal domain.
  
     0.478
Krac_6888
Resolvase domain protein; COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR006119:IPR011109; KEGG: amt:Amet_3360 resolvase domain-containing protein; PFAM: Resolvase domain; Recombinase; SPTR: B2JSE0 Resolvase domain protein; PFAM: Recombinase; Resolvase, N terminal domain.
  
     0.457
Krac_3131
Transposase Tn3 family protein; COGs: COG4644 Transposase and inactivated derivatives TnpA family; InterPro IPR002513; KEGG: bcq:BCQ_PI156 Tn4652, transposase; PFAM: transposase Tn3 family protein; SPTR: B3ZXC5 Transposase; PFAM: Transposase.
  
     0.432
Krac_3135
Transposase Tn3 family protein; COGs: COG4644 Transposase and inactivated derivatives TnpA family; InterPro IPR002513; KEGG: bcq:BCQ_PI156 Tn4652, transposase; PFAM: transposase Tn3 family protein; SPTR: B3ZXC5 Transposase; PFAM: Transposase; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type.
  
     0.430
Krac_1936
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: pjd:Pjdr2_4056 hypothetical protein; SMART: helix-turn-helix domain protein; SPTR: C6D6B3 Putative uncharacterized protein.
       0.419
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.