STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_2026Cupin 2 conserved barrel domain protein; COGs: COG4101 mannose-6-phosphate isomerase; InterPro IPR013096:IPR014710:IPR011051; KEGG: rso:RSc0220 hypothetical protein; PFAM: Cupin 2 conserved barrel domain protein; SPTR: Q8Y2W2 Probable mannose-6-phosphate isomerase protein; PFAM: Cupin domain. (157 aa)    
Predicted Functional Partners:
Krac_2027
KEGG: cce:Ccel_1396 hypothetical protein; SPTR: B8I1F2 Putative uncharacterized protein.
       0.565
Krac_4181
Phosphogluconate dehydrogenase, NAD-binding, putative; COGs: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase; InterProIPR006115:IPR015814:IPR016040:IPR013328:IPR 008927; KEGG: ava:Ava_4075 6-phosphogluconate dehydrogenase, NAD-binding; PFAM: Phosphogluconate dehydrogenase, NAD-binding, putative-like; 6-phosphogluconate dehydrogenase NAD-binding; SPTR: Q3M5Q7 6-phosphogluconate dehydrogenase, NAD-binding; PFAM: Domain of unknown function (DUF1932); NAD binding domain of 6-phosphogluconate dehydrogenase.
  
     0.517
Krac_9091
KEGG: rlg:Rleg_2678 phytanoyl-CoA dioxygenase; SPTR: C6B3Z1 Phytanoyl-CoA dioxygenase; PFAM: Phytanoyl-CoA dioxygenase (PhyH).
  
     0.512
kynU
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
    
  0.502
Krac_8207
Biphenyl-2,3-diol 1,2-dioxygenase; COGs: COG2514 ring-cleavage extradiol dioxygenase; InterPro IPR004360; KEGG: rha:RHA1_ro00536 extradiol dioxygenase, type I; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; PRIAM: Biphenyl-2,3-diol 1,2-dioxygenase; SPTR: O69351 2,3-dihydroxybiphenyl 1,2-dioxygenase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
  
     0.486
Krac_3878
Glyoxalase/bleomycin resistance protein/dioxygenase; InterPro IPR004360; KEGG: rha:RHA1_ro00536 extradiol dioxygenase, type I; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Q9KWM6 Extradiol dioxygenase, type I; manually curated; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
  
     0.484
EFH90187.1
Conserved hypothetical protein; COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; KEGG: hypothetical protein; SPTR: A6SRY5 Predicted protein; PFAM: NMT1/THI5 like.
  
     0.472
Krac_9423
Glyoxalase/bleomycin resistance protein/dioxygenase; InterPro IPR004360; KEGG: rha:RHA1_ro00536 extradiol dioxygenase, type I; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Q9KWM6 Extradiol dioxygenase, type I; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
  
     0.452
Krac_3396
FHA domain containing protein; InterPro IPR000253:IPR008984; KEGG: fra:Francci3_3358 hypothetical protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: Q2UZD9 Putative efflux protein; PFAM: FHA domain.
  
     0.445
Krac_4977
Xenobiotic compound monooxygenase A subunit; COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR011251:IPR016215; KEGG: ava:Ava_1266 xenobiotic compound monooxygenase A subunit; SPTR: Q3MDP6 Xenobiotic compound monooxygenase, DszA family, A subunit; PFAM: Luciferase-like monooxygenase.
  
     0.433
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.