STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_2079Membrane-bound metal-dependent hydrolase; InterPro IPR007404; KEGG: nis:NIS_0731 hypothetical protein; PFAM: membrane-bound metal-dependent hydrolase; SPTR: C3XKG6 TcpI; PFAM: Predicted membrane-bound metal-dependent hydrolase (DUF457). (213 aa)    
Predicted Functional Partners:
EFH89105.1
COGs: COG4469 Competence protein; InterPro IPR010330; KEGG: bha:BH2857 hypothetical protein; PFAM: Competence CoiA family protein; SPTR: C2QLA6 Putative uncharacterized protein; PFAM: Competence protein CoiA-like family.
  
     0.639
Krac_2078
Adenosylcobinamide-phosphateguanylyltransferase; COGs: COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase; InterPro IPR003203; KEGG: dra:DR_A0020 cobinamide kinase/cobinamide phosphate guanylyltransferase; PFAM: cobalbumin biosynthesis protein; PRIAM: Adenosylcobinamide-phosphate guanylyltransferase; SPTR: Q9RZD3 Cobinamide kinase/cobinamide phosphate guanylyltransferase; PFAM: Cobinamide kinase / cobinamide phosphate guanyltransferase.
       0.514
EFH90621.1
KEGG: bra:BRADO2874 hypothetical protein; SPTR: B5JI09 Putative uncharacterized protein; PFAM: Protein of unknown function, DUF488.
   
    0.478
Krac_3582
Protein of unknown function DUF1130; InterPro IPR010556; KEGG: spe:Spro_4940 hypothetical protein; PFAM: protein of unknown function DUF1130; SPTR: C8SWX5 Putative uncharacterized protein; PFAM: Protein of unknown function, DUF488.
   
    0.478
Krac_5858
Protein of unknown function DUF524; InterPro IPR007505; KEGG: gka:GK1379 hypothetical protein; PFAM: protein of unknown function DUF524; SPTR: Q5L072 Hypothetical conserved protein; PFAM: Domain of unknown function (DUF2357); Protein of unknown function (DUF524).
  
     0.477
Krac_2080
Glycoside hydrolase family 2 sugar binding; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterProIPR013812:IPR013781:IPR006104:IPR006102:IPR 017853:IPR008979; KEGG: rca:Rcas_2644 beta-mannosidase; PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; SPTR: A7NMF4 Beta-mannosidase; PFAM: domain; Glycosyl hydrolases family 2, sugar binding domain.
       0.455
EFH89326.1
InterPro IPR004155:IPR011989:IPR016024; KEGG: ana:alr1903 hypothetical protein; PFAM: PBS lyase HEAT domain protein repeat-containing protein; SMART: PBS lyase HEAT domain protein repeat-containing protein; SPTR: Q8YVS1 Alr1903 protein.
 
    0.415
EFH90589.1
Putative methyl-accepting chemotaxis sensory transducer; InterPro IPR003660; KEGG: pfl:PFL_2537 methyl-accepting chemotaxis protein; PFAM: histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; SPTR: Q4KDN9 Methyl-accepting chemotaxis protein; PFAM: HAMP domain.
  
     0.414
Krac_9851
KEGG: app:CAP2UW1_2761 hypothetical protein; SPTR: C7RTA9 Putative uncharacterized protein; PFAM: Dienelactone hydrolase family.
  
     0.411
Krac_3850
KEGG: app:CAP2UW1_2761 hypothetical protein; SPTR: C7RTA9 Putative uncharacterized protein; PFAM: Dienelactone hydrolase family.
  
     0.404
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.