STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_2198Glycoside hydrolase family 30; COGs: COG5520 O-Glycosyl hydrolase; InterPro IPR013781:IPR001139:IPR017853; KEGG: cai:Caci_3714 glucan endo-1,6-beta-glucosidase; PFAM: glycoside hydrolase family 30; SPTR: C7QBZ7 Glucan endo-1,6-beta-glucosidase; PFAM: O-Glycosyl hydrolase family 30; Belongs to the glycosyl hydrolase 30 family. (650 aa)    
Predicted Functional Partners:
Krac_4318
Myo-inositol catabolism IolB domain protein; COGs: COG3718 Uncharacterized protein involved in inositol metabolism; InterPro IPR010669:IPR011051; KEGG: sus:Acid_1480 myo-inositol catabolism IolB domain-containing protein; PFAM: Myo-inositol catabolism IolB domain protein; SPTR: Q028T0 Myo-inositol catabolism IolB domain protein; PFAM: KduI/IolB family.
   
    0.737
Krac_4348
Carbohydrate binding family 6; InterProIPR005084:IPR013785:IPR002241:IPR017853:IPR 008979; KEGG: sma:SAV_1077 melibiase; PFAM: Carbohydrate binding family 6; SPTR: Q82P56 Putative alpha-galactosidase; PFAM: Melibiase; Carbohydrate binding module (family 6).
  
  
  0.718
Krac_4779
Coagulation factor 5/8 type domain protein; InterProIPR017853:IPR008979:IPR008985:IPR000421:IPR 002345:IPR018087:IPR006103:IPR013320:IPR013781; KEGG: cai:Caci_4312 coagulation factor 5/8 type domain protein; PFAM: coagulation factor 5/8 type domain protein; glycoside hydrolase family 2 TIM barrel; SPTR: C7QJT8 Coagulation factor 5/8 type domain protein; PFAM: F5/8 type C domain; Glycosyl hydrolases family 2, TIM barrel domain; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type.
 
 
  0.716
Krac_5811
Carbohydrate binding family 6; InterProIPR013785:IPR017853:IPR008979:IPR017868:IPR 005084:IPR002241; KEGG: sma:SAV_1077 melibiase; PFAM: Carbohydrate binding family 6; SPTR: Q82P56 Putative alpha-galactosidase; PFAM: Melibiase; Carbohydrate binding module (family 6).
  
  
  0.703
Krac_0570
Coagulation factor 5/8 type domain protein; InterProIPR002241:IPR013785:IPR013780:IPR002345:IPR 013222:IPR000421:IPR000111:IPR018905:IPR017853:IPR008979; KEGG: cai:Caci_5007 alpha-galactosidase; PFAM: coagulation factor 5/8 type domain protein; Glycosyl hydrolase family 98 putative carbohydrate binding module; Alpha-galactosidase, NPCBM associated NEW3 domain; glycoside hydrolase clan GH-D; SMART: Glycosyl hydrolase family 98 putative carbohydrate binding module; SPTR: C7Q3D1 Alpha-galactosidase; PFAM: NPCBM-associated, NEW3 domain of alpha-galactosidase; F5/8 type C domain; NPCBM/NEW2 [...]
  
  
  0.686
Krac_4780
InterPro IPR008979:IPR000421; KEGG: cai:Caci_3492 coagulation factor 5/8 type domain protein; PFAM: coagulation factor 5/8 type domain protein; SPTR: C7Q978 Coagulation factor 5/8 type domain protein; PFAM: F5/8 type C domain.
 
 
  0.632
Krac_4783
Glycoside hydrolase family 16; InterPro IPR008985:IPR000757:IPR013320; KEGG: ace:Acel_0129 carbohydrate-binding family 6 protein; PFAM: glycoside hydrolase family 16; SPTR: Q2HR46 Putative endo-1,3-beta-glucanase; PFAM: Glycosyl hydrolases family 16.
 
   
 0.601
Krac_7123
Glycoside hydrolase family 43; COGs: COG3507 Beta-xylosidase; InterPro IPR006710; KEGG: oih:OB2087 arabinofuranosidase; PFAM: glycoside hydrolase family 43; SPTR: Q8EPL4 Xylosidase : arabinofuranosidase; PFAM: Glycosyl hydrolases family 43.
 
 
 0.581
Krac_0976
Glycoside hydrolase family 5; COGs: COG2730 Endoglucanase; InterProIPR001956:IPR013781:IPR018087:IPR017853:IPR 008965:IPR001547; KEGG: ace:Acel_0614 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 5; type 3a cellulose-binding domain protein; SPTR: P54583 Endoglucanase E1; PFAM: Cellulose binding domain; Cellulase (glycosyl hydrolase family 5).
 
  
 0.567
Krac_9959
Glycoside hydrolase family 5; COGs: COG2730 Endoglucanase; InterProIPR017853:IPR008965:IPR001956:IPR013781:IPR 018087:IPR001547; KEGG: ace:Acel_0614 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 5; type 3a cellulose-binding domain protein; SPTR: P54583 Endoglucanase E1; PFAM: Cellulose binding domain; Cellulase (glycosyl hydrolase family 5).
 
  
 0.567
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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