STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Cooccurrence
Coexpression
Experiments
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[Homology]
Score
Krac_2331Dyp-type peroxidase family; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. (421 aa)    
Predicted Functional Partners:
Krac_2330
Peptidase M75, Imelysin; COGs: COG2822 periplasmic lipoprotein involved in iron transport; InterPro IPR018976:IPR008972; KEGG: pjd:Pjdr2_0995 lipoprotein precursor; PFAM: Peptidase M75, Imelysin; SPTR: C6CVG1 Lipoprotein; PFAM: Imelysin.
 
  
 0.988
Krac_2332
Iron permease FTR1; COGs: COG0672 High-affinity Fe2+/Pb2+ permease; InterPro IPR004923; KEGG: nml:Namu_4913 iron permease FTR1; PFAM: iron permease FTR1; SPTR: C8X9Y7 Iron permease FTR1; PFAM: Iron permease FTR1 family; TIGRFAM: FTR1 family protein.
 
  
 0.970
Krac_1228
Copper resistance protein CopC; COGs: COG2372 conserved hypothetical protein homolog of Cu resistance protein CopC; InterProIPR007348:IPR008457:IPR010916:IPR014755:IPR 014756; KEGG: sco:SCO4053 transport integral membrane protein; PFAM: copper resistance protein CopC; copper resistance D domain protein; SPTR: D1CA49 Copper resistance protein CopC; PFAM: Copper resistance protein CopC.
 
  
 0.750
Krac_7870
COGs: COG1276 Putative copper export protein; InterPro IPR014756:IPR007348:IPR008457:IPR014755; KEGG: ttr:Tter_1118 copper resistance protein CopC; PFAM: copper resistance protein CopC; copper resistance D domain protein; SPTR: D1CB68 Copper resistance protein CopC; PFAM: Copper resistance protein CopC; Copper resistance protein D.
 
  
 0.742
Krac_2045
FTR1 family protein; COGs: COG0672 High-affinity Fe2+/Pb2+ permease; KEGG: aca:ACP_1210 FTR1 family protein; SPTR: B7DMS3 Iron permease FTR1; PFAM: Iron permease FTR1 family; TIGRFAM: FTR1 family protein.
 
  
 0.722
Krac_8339
COGs: COG1276 Putative copper export protein; InterPro IPR007348:IPR008457:IPR014756:IPR014755; KEGG: rca:Rcas_2633 copper resistance protein CopC; PFAM: copper resistance protein CopC; copper resistance D domain protein; SPTR: D1CA49 Copper resistance protein CopC; PFAM: Copper resistance protein CopC; Copper resistance protein D.
 
  
 0.692
Krac_6794
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR002869:IPR009014:IPR019752:IPR015941:IPR 002880; KEGG: chl:Chy400_1038 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; SPTR: B9LLV4 Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; PFAM: domain; Pyruvate ferredoxin/flavodoxin oxidoreductase.
     
 0.681
Krac_8525
Copper resistance protein CopC; COGs: COG2372 conserved hypothetical protein homolog of Cu resistance protein CopC; InterPro IPR014755:IPR014756:IPR007348; KEGG: rca:Rcas_2633 copper resistance protein CopC; PFAM: copper resistance protein CopC; SPTR: A7NME4 Copper resistance protein CopC; PFAM: Copper resistance protein CopC; Copper resistance protein D.
  
  
 0.635
Krac_2941
COGs: COG0531 Amino acid transporter; InterPro IPR002293:IPR004841; KEGG: sro:Sros_7845 amino acid transporter-like protein; PFAM: amino acid permease-associated region; SPTR: C4E2H5 Amino acid transporter; PFAM: Amino acid permease.
  
     0.440
Krac_2329
Protein of unknown function DUF893 YccS/YhfK; COGs: COG1289 membrane protein; InterPro IPR010289; KEGG: npu:Npun_R2278 protein of unknown function DUF893, YccS/YhfK; PFAM: protein of unknown function DUF893 YccS/YhfK; SPTR: B2J7D1 Putative uncharacterized protein; PFAM: Fusaric acid resistance protein family.
       0.400
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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