STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_2559ABC transporter related protein; COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: mba:Mbar_A2562 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: B9L490 Cobalt import ATP-binding protein CbiO 2; PFAM: ABC transporter; TIGRFAM: cobalt transport protein ATP-binding subunit. (273 aa)    
Predicted Functional Partners:
Krac_2557
Cobalamin (vitamin B12) biosynthesis CbiM protein; COGs: COG0310 ABC-type Co2+ transport system permease component; InterPro IPR020486:IPR002751; KEGG: tro:trd_A0602 cobalt transport protein CbiM; PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; SPTR: B9L488 Cobalt transport protein CbiM; PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM.
 
 0.992
Krac_2558
Cobalt ABC transporter, inner membrane subunit CbiQ; COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR012809:IPR003339; KEGG: ttr:Tter_0883 cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; SPTR: D1CFU4 Cobalt ABC transporter, inner membrane subunit CbiQ; TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ.
 
 0.991
EFH89658.1
COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339; KEGG: rxy:Rxyl_2470 cobalt transport protein; PFAM: cobalt transport protein; SPTR: Q1AT81 Cobalt transport protein; PFAM: Cobalt transport protein.
 0.975
Krac_1281
BioY protein; COGs: COG1268 conserved hypothetical protein; InterPro IPR003784; KEGG: tro:trd_A0767 BioY protein; PFAM: BioY protein; SPTR: B9L4Q3 BioY protein; PFAM: BioY family.
   
 0.900
EFH88699.1
COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339; KEGG: sth:STH3043 cobalt ABC transporter permease protein; PFAM: cobalt transport protein; SPTR: A1HQP4 Cobalt transport protein; PFAM: Cobalt transport protein.
 
 0.845
EFH89655.1
Conserved hypothetical protein; COGs: COG4684 membrane protein; KEGG: rxy:Rxyl_2473 hypothetical protein; SPTR: Q1AT78 Putative uncharacterized protein.
    
 
 0.805
Krac_1956
COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339; KEGG: mma:MM_3017 ABC transporter, permease protein; PFAM: cobalt transport protein; SPTR: Q8PSQ9 ABC transporter, permease protein; PFAM: Cobalt transport protein.
 
 0.790
Krac_2013
COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339; KEGG: sro:Sros_8786 ABC-type cobalt transport system permease component CbiQ and related transporter-like protein; PFAM: cobalt transport protein; SPTR: C4E190 ABC-type cobalt transport system, permease component CbiQ; PFAM: Cobalt transport protein.
 
 0.772
Krac_2793
Cobalt transport protein; InterPro IPR003339; KEGG: tpe:Tpen_1104 cobalt transport protein; PFAM: cobalt transport protein; SPTR: D1J9S0 Putative cobalt ABC transporter, permease component; PFAM: Cobalt transport protein.
 
 0.736
Krac_2012
Protein of unknown function DUF1393; InterPro IPR009825; KEGG: kcr:Kcr_0289 hypothetical protein; PFAM: protein of unknown function DUF1393; SPTR: B1L3L8 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1393).
   
 
 0.689
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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