STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_2664InterPro IPR016181:IPR000182; KEGG: pjd:Pjdr2_6123 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C6D7B5 GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family. (322 aa)    
Predicted Functional Partners:
Krac_6794
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR002869:IPR009014:IPR019752:IPR015941:IPR 002880; KEGG: chl:Chy400_1038 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; SPTR: B9LLV4 Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; PFAM: domain; Pyruvate ferredoxin/flavodoxin oxidoreductase.
 
  
  0.571
Krac_7251
GCN5-related N-acetyltransferase; InterPro IPR016181:IPR000182; KEGG: beta-N-acetylglucosaminidase; K01207 beta-N-acetylhexosaminidase; PFAM: GCN5-related N-acetyltransferase; SPTR: B0XXA8 Beta-N-acetylglucosaminidase, putative; PFAM: Acetyltransferase (GNAT) family.
    
  0.488
Krac_7159
Transcriptional regulator, XRE family; InterProIPR001387:IPR014710:IPR011051:IPR010982:IPR 013096; KEGG: rop:ROP_71970 hypothetical protein; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; SPTR: A8U412 Transcriptional regulator, XRE family with cupin sensor; PFAM: Cupin domain; Helix-turn-helix.
    
  0.456
argH
COGs: COG0165 Argininosuccinate lyase; InterProIPR000362:IPR008948:IPR009049:IPR003031:IPR 020557; KEGG: ttr:Tter_0314 argininosuccinate lyase; PFAM: fumarate lyase; PRIAM: Argininosuccinate lyase; SPTR: D1CE80 Argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: Lyase; TIGRFAM: argininosuccinate lyase.
  
 
 0.446
EFH90150.1
COGs: COG0137 Argininosuccinate synthase; InterPro IPR014729:IPR001518; KEGG: ttr:Tter_0313 argininosuccinate synthase; PFAM: argininosuccinate synthase; PRIAM: Argininosuccinate synthase; SPTR: D1CE79 Argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
 
 0.438
argG
COGs: COG0137 Argininosuccinate synthase; InterPro IPR014729:IPR001518:IPR018223; KEGG: det:DET1260 argininosuccinate synthase; PFAM: argininosuccinate synthase; PRIAM: Argininosuccinate synthase; SPTR: Q1Q1A9 Strongly similar to argininosuccinate synthetase; TIGRFAM: argininosuccinate synthase; PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase.
  
 
 0.438
Krac_8408
NUDIX hydrolase; COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR000086:IPR015797; KEGG: bbe:BBR47_43000 hypothetical protein; PFAM: NUDIX hydrolase; SPTR: C0ZI03 Putative uncharacterized protein; PFAM: NUDIX domain.
  
     0.430
Krac_8023
InterPro IPR018711; KEGG: rrs:RoseRS_1115 hypothetical protein; PFAM: Protein of unknown function DUF2233, periplasmic; SPTR: A5USB9 Putative uncharacterized protein; PFAM: Predicted periplasmic protein (DUF2233).
  
     0.429
Krac_2663
GCN5-related N-acetyltransferase; InterPro IPR016181:IPR000182; KEGG: mxa:MXAN_1237 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Q1DCX7 Acetyltransferase, GNAT family; PFAM: Acetyltransferase (GNAT) family.
    
  0.428
Krac_5064
KEGG: cyb:CYB_2816 hypothetical protein; SPTR: Q2JI32 Putative uncharacterized protein.
  
     0.423
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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