STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_3307ABC-3 protein; COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: mbn:Mboo_1167 ABC-3 protein; PFAM: ABC-3 protein; SPTR: A7I7H4 ABC-3 protein; PFAM: ABC 3 transport family. (294 aa)    
Predicted Functional Partners:
Krac_1444
ABC transporter related protein; COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: fra:Francci3_2478 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q2JA47 ABC transporter related; PFAM: ABC transporter.
 0.933
Krac_1450
ABC transporter related protein; COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: cai:Caci_3196 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C7Q697 ABC transporter related; PFAM: ABC transporter.
 
 0.933
Krac_4089
ABC transporter related protein; COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: cai:Caci_3196 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C7Q697 ABC transporter related; PFAM: ABC transporter.
 0.933
Krac_4092
ABC transporter related protein; COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: rop:ROP_44060 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C1BAF0 Putative ABC transporter ATP-binding protein; PFAM: ABC transporter.
 
 0.933
Krac_6693
ABC transporter related protein; COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: rop:ROP_44060 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C1BAF0 Putative ABC transporter ATP-binding protein; PFAM: ABC transporter.
 0.933
Krac_1445
Periplasmic solute binding protein; COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127; KEGG: fra:Francci3_2479 periplasmic solute binding protein; PFAM: periplasmic solute binding protein; SPTR: Q2JA46 Periplasmic solute binding protein; PFAM: Periplasmic solute binding protein family.
 
 
 0.901
Krac_1449
Periplasmic solute binding protein; COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127; KEGG: fra:Francci3_2479 periplasmic solute binding protein; PFAM: periplasmic solute binding protein; SPTR: Q2JA46 Periplasmic solute binding protein; PFAM: Periplasmic solute binding protein family.
 
 
 0.901
Krac_4090
Periplasmic solute binding protein; COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127; KEGG: fra:Francci3_2479 periplasmic solute binding protein; PFAM: periplasmic solute binding protein; SPTR: Q2JA46 Periplasmic solute binding protein; PFAM: Periplasmic solute binding protein family.
 
 
 0.901
Krac_4091
Periplasmic solute binding protein; COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127; KEGG: mbn:Mboo_1169 periplasmic solute binding protein; PFAM: periplasmic solute binding protein; SPTR: A7I7H6 Periplasmic solute binding protein; PFAM: Periplasmic solute binding protein family.
 
 
 0.901
Krac_7874
Periplasmic solute binding protein; COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127; KEGG: bvi:Bcep1808_2714 periplasmic solute binding protein; PFAM: periplasmic solute binding protein; SPTR: A4JHF2 Periplasmic solute binding protein; PFAM: Periplasmic solute binding protein family.
 
 
 0.901
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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