STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_3573Hypothetical protein; InterPro IPR009057; KEGG: sro:Sros_9055 hypothetical protein; SPTR: Q82NT7 Putative IS630 family ISPsy1-like transposase. (284 aa)    
Predicted Functional Partners:
Krac_3572
Integrase catalytic region; InterPro IPR001584; KEGG: ami:Amir_5010 aminoglycoside phosphotransferase; PFAM: Integrase catalytic region; SPTR: C6WS13 Aminoglycoside phosphotransferase; PFAM: Integrase core domain.
       0.773
Krac_3574
Hypothetical protein; InterPro IPR009057; KEGG: rxy:Rxyl_3067 IS630 family transposase; SPTR: Q1AYN4 Putative uncharacterized protein.
       0.527
Krac_3575
Hypothetical protein; KEGG: bde:BDP_0127 ABC-type sugar transport system, permease component; SPTR: B1S7Y8 Putative uncharacterized protein.
       0.504
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.