STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_3637COGs: COG3336 membrane protein; InterPro IPR019108; KEGG: rca:Rcas_3554 membrane protein-like protein; PFAM: Cytochrome c oxidase caa3-type, assembly factor CtaG-related; SPTR: A7NPV7 Membrane protein-like protein; PFAM: Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG); TIGRFAM: cytochrome c oxidase assembly factor CtaG. (290 aa)    
Predicted Functional Partners:
Krac_8626
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
  
 0.965
Krac_8625
Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
 
  
 0.748
Krac_7161
Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
 
  
 0.743
Krac_8623
Cytochrome-c oxidase; COGs: COG1845 Heme/copper-type cytochrome/quinol oxidase subunit 3; InterPro IPR000298; KEGG: mca:MCA0883 cytochrome c oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; PRIAM: Cytochrome-c oxidase; SPTR: Q60AH0 Cytochrome c oxidase, subunit III; PFAM: Cytochrome c oxidase subunit III.
 
  
 0.641
Krac_4208
Cytochrome oxidase assembly; COGs: COG1612 Uncharacterized protein required for cytochrome oxidase assembly; InterPro IPR003780; KEGG: afl:Aflv_1870 heme A synthase (monooxygenase); PFAM: cytochrome oxidase assembly; SPTR: B7GGM2 Heme A synthase (Monooxygenase); PFAM: Cytochrome oxidase assembly protein.
 
   
 0.511
Krac_8462
LmbE family protein; COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: hau:Haur_3024 LmbE family protein; PFAM: LmbE family protein; SPTR: A9B4T9 LmbE family protein; PFAM: GlcNAc-PI de-N-acetylase.
  
     0.482
Krac_8639
COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR012335:IPR012336:IPR003782:IPR017936; KEGG: sti:Sthe_0038 electron transport protein SCO1/SenC; PFAM: electron transport protein SCO1/SenC; SPTR: D1C5G1 Electron transport protein SCO1/SenC; PFAM: SCO1/SenC.
 
   
 0.451
Krac_2104
1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-gluc opyranosidedeacetylase; COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR017810:IPR003737; KEGG: hau:Haur_3024 LmbE family protein; PFAM: LmbE family protein; SPTR: C0UD07 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase; TIGRFAM:1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D -glucopyranosidedeacetylase; PFAM: GlcNAc-PI de-N-acetylase; TIGRFAM: 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase.
  
     0.417
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
   
 0.403
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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