STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_3699Multi-sensor signal transduction histidine kinase; COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterProIPR000014:IPR004358:IPR003661:IPR003594:IPR 005467:IPR000700:IPR009082:IPR013656; KEGG: scl:sce0713 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: Q092A1 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phos [...] (571 aa)    
Predicted Functional Partners:
EFH89397.1
COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006; KEGG: pth:PTH_1831 response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A5D153 Response regulator; PFAM: Response regulator receiver domain.
  
     0.771
EFH89556.1
COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR011006:IPR001789; KEGG: swo:Swol_0381 sensory box histidine kinase/response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Q0AZY5 Sensor protein; PFAM: Response regulator receiver domain.
  
     0.771
Krac_7564
COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006; KEGG: ter:Tery_3248 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Q10ZG2 Response regulator receiver protein; PFAM: Response regulator receiver domain.
  
     0.770
Krac_9842
COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011006:IPR001789; KEGG: phe:Phep_2657 response regulator receiver; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A6E8D4 Response regulator receiver; PFAM: Response regulator receiver domain.
  
     0.769
EFH90947.1
COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006; KEGG: ttu:TERTU_0236 putative CheA signal transduction histidine kinase; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A7BTN9 Response regulator receiver protein; PFAM: Response regulator receiver domain.
  
     0.768
Krac_7076
COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR011006; KEGG: bba:Bd3360 transcriptional regulatory protein ZraR; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Q1JVH2 Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: Response regulator receiver domain.
  
     0.767
Krac_7916
COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011006:IPR001789; KEGG: net:Neut_1130 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: C5SA97 Response regulator receiver protein; PFAM: Response regulator receiver domain.
  
     0.762
EFH90143.1
COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006; KEGG: bbe:BBR47_15040 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: C0Z911 Two-component response regulator; PFAM: Response regulator receiver domain.
  
     0.761
Krac_7486
COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006; KEGG: pth:PTH_1831 response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Q2C8F4 Putative DNA-binding response regulator; PFAM: Response regulator receiver domain.
  
     0.755
Krac_9094
COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006; KEGG: aci:ACIAD0786 twitching motility protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Q6FE19 Twitching motility protein; PFAM: Response regulator receiver domain.
  
     0.753
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.