STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_3726InterPro IPR001647:IPR009057:IPR012287; KEGG: scl:sce4712 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: C1WUY5 Transcriptional regulator, tetR family; PFAM: Bacterial regulatory proteins, tetR family. (183 aa)    
Predicted Functional Partners:
Krac_3727
YCII-related protein; InterPro IPR011008:IPR005545; KEGG: sat:SYN_02352 putative cytoplasmic protein; PFAM: YCII-related; SPTR: Q2LQM0 Hypothetical cytosolic protein; PFAM: YCII-related domain.
       0.773
Krac_3728
KEGG: paired box protein pax-6; SPTR: Q17IK2 Paired box protein pax-6.
       0.773
Krac_3729
Histidine triad (HIT) protein; COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310:IPR011146:IPR011151; KEGG: iho:Igni_1099 histidine triad (HIT) protein; PFAM: histidine triad (HIT) protein; SPTR: C6JFF1 Putative uncharacterized protein; PFAM: HIT domain.
       0.773
Krac_0908
KEGG: nfa:nfa23060 hypothetical protein; SPTR: Q5YXD8 Putative uncharacterized protein.
  
     0.498
Krac_0013
KEGG: nfa:nfa23060 hypothetical protein; SPTR: Q5YXD8 Putative uncharacterized protein.
  
     0.489
EFH90636.1
KEGG: hau:Haur_2917 hypothetical protein; SPTR: A9B3I3 Putative uncharacterized protein.
  
     0.463
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.