STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_3996Transposase IS204/IS1001/IS1096/IS1165 family protein; COGs: COG3464 Transposase and inactivated derivatives; InterPro IPR017894:IPR002560:IPR018073; KEGG: mno:Mnod_7841 transposase IS204/IS1001/IS1096/IS1165 family protein; PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; SPTR: Q099P9 Transposase; PFAM: Transposase. (558 aa)    
Predicted Functional Partners:
Krac_3997
Hypothetical protein.
       0.544
Krac_3995
Hypothetical protein.
       0.507
Krac_7449
Resolvase domain protein; COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR006119:IPR011109; KEGG: amt:Amet_4291 resolvase domain-containing protein; PFAM: Resolvase domain; Recombinase; SPTR: B2JY29 Resolvase domain protein; PFAM: Recombinase; Resolvase, N terminal domain.
  
     0.494
Krac_6888
Resolvase domain protein; COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR006119:IPR011109; KEGG: amt:Amet_3360 resolvase domain-containing protein; PFAM: Resolvase domain; Recombinase; SPTR: B2JSE0 Resolvase domain protein; PFAM: Recombinase; Resolvase, N terminal domain.
  
     0.468
Krac_3998
KEGG: ter:Tery_0093 hypothetical protein; SPTR: Q11A76 Putative uncharacterized protein.
       0.460
Krac_3131
Transposase Tn3 family protein; COGs: COG4644 Transposase and inactivated derivatives TnpA family; InterPro IPR002513; KEGG: bcq:BCQ_PI156 Tn4652, transposase; PFAM: transposase Tn3 family protein; SPTR: B3ZXC5 Transposase; PFAM: Transposase.
  
     0.456
Krac_3135
Transposase Tn3 family protein; COGs: COG4644 Transposase and inactivated derivatives TnpA family; InterPro IPR002513; KEGG: bcq:BCQ_PI156 Tn4652, transposase; PFAM: transposase Tn3 family protein; SPTR: B3ZXC5 Transposase; PFAM: Transposase; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type.
  
     0.455
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.