STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_4154COGs: COG2059 Chromate transport protein ChrA; InterPro IPR003370; KEGG: bid:Bind_0647 chromate transporter; PFAM: Chromate transporter; SPTR: C6MSK8 Chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter. (171 aa)    
Predicted Functional Partners:
Krac_4153
COGs: COG2059 Chromate transport protein ChrA; InterPro IPR003370; KEGG: rfr:Rfer_2756 chromate transporter; PFAM: Chromate transporter; SPTR: Q21UT5 Chromate transporter; PFAM: Chromate transporter.
 
     0.943
Krac_8722
COGs: COG2059 Chromate transport protein ChrA; InterPro IPR003370; KEGG: abc:ACICU_01496 chromate transporter; PFAM: Chromate transporter; SPTR: B2HYS1 Chromate transport protein ChrA; PFAM: Chromate transporter.
 
     0.720
EFH90413.1
KEGG: nth:Nther_2043 hypothetical protein; SPTR: B2A719 Putative uncharacterized protein.
  
     0.427
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.