STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_4589KEGG: cyc:PCC7424_5670 transposase ISAs1 family protein; SPTR: B7KLR5 Transposase ISAs1 family protein. (95 aa)    
Predicted Functional Partners:
Krac_0237
InterPro IPR002559; KEGG: fra:Francci3_2121 transposase, IS4; PFAM: transposase IS4 family protein; SPTR: Q2JDZ3 Transposase, IS4; PFAM: Transposase DDE domain.
  
     0.775
EFH88781.1
InterPro IPR002559; KEGG: fra:Francci3_2121 transposase, IS4; PFAM: transposase IS4 family protein; SPTR: Q2JDZ3 Transposase, IS4; PFAM: Transposase DDE domain.
  
     0.775
EFH89123.1
Transposase, IS4; KEGG: fra:Francci3_2121 transposase, IS4; SPTR: Q2JDZ3 Transposase, IS4.
  
     0.775
EFH89365.1
Hypothetical protein; KEGG: fra:Francci3_2121 transposase, IS4; SPTR: Q2JDZ3 Transposase, IS4; manually curated; PFAM: Transposase DDE domain.
  
     0.775
Krac_1350
InterPro IPR002559; KEGG: fra:Francci3_2121 transposase, IS4; PFAM: transposase IS4 family protein; SPTR: Q2JDZ3 Transposase, IS4; PFAM: Transposase DDE domain.
  
     0.775
Krac_1871
InterPro IPR002559; KEGG: fra:Francci3_2121 transposase, IS4; PFAM: transposase IS4 family protein; SPTR: Q2JDZ3 Transposase, IS4; PFAM: Transposase DDE domain.
  
     0.775
Krac_3204
Transposase, IS4; KEGG: fra:Francci3_2121 transposase, IS4; SPTR: Q2JDZ3 Transposase, IS4.
  
     0.775
Krac_3429
InterPro IPR002559; KEGG: fra:Francci3_2121 transposase, IS4; PFAM: transposase IS4 family protein; SPTR: Q2JDZ3 Transposase, IS4; PFAM: Transposase DDE domain.
  
     0.775
Krac_3967
Hypothetical protein; KEGG: fra:Francci3_2121 transposase, IS4; SPTR: Q2JDZ3 Transposase, IS4; manually curated; PFAM: Transposase DDE domain.
  
     0.775
Krac_3985
InterPro IPR002559; KEGG: fra:Francci3_2121 transposase, IS4; PFAM: transposase IS4 family protein; SPTR: Q2JDZ3 Transposase, IS4; PFAM: Transposase DDE domain.
  
     0.775
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.