STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_4638Ion transport 2 domain protein; InterPro IPR013099; KEGG: gme:Gmet_3488 K+ channel, pore region; PFAM: Ion transport 2 domain protein; SPTR: Q39PY1 K+ channel, pore region; PFAM: Ion channel. (387 aa)    
Predicted Functional Partners:
Krac_6192
InterPro IPR011047; KEGG: sus:Acid_6257 hypothetical protein; SPTR: B9XCZ7 Putative uncharacterized protein.
  
     0.758
Krac_2060
Conserved hypothetical protein; InterPro IPR011047; KEGG: aba:Acid345_1484 hypothetical protein; SPTR: Q1IRL4 Putative uncharacterized protein.
  
     0.723
Krac_2153
Pyrrolo-quinoline quinone; InterPro IPR011047:IPR018391:IPR002372; KEGG: ace:Acel_0402 pyrrolo-quinoline quinone; PFAM: Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone beta-propeller repeat; SPTR: A0LRW6 Pyrrolo-quinoline quinone.
  
     0.722
Krac_4762
Hypothetical protein; InterPro IPR008979; KEGG: sus:Acid_7414 hypothetical protein; SPTR: Q01PU7 Putative uncharacterized protein; PFAM: MAM domain.
  
     0.693
Krac_5597
KEGG: sus:Acid_0160 hypothetical protein; SPTR: Q02CP1 Putative uncharacterized protein.
  
     0.590
Krac_2399
KEGG: gbm:Gbem_1405 hypothetical protein; SPTR: B5EIQ9 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1345).
  
     0.579
Krac_2685
InterPro IPR011991:IPR000835; KEGG: ttr:Tter_1083 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: Q1IME8 Transcriptional regulator, MarR family; PFAM: MarR family.
  
     0.525
Krac_3475
KEGG: ttr:Tter_2540 major facilitator transporter; SPTR: D1CI58 Major facilitator transporter.
  
     0.514
Krac_5811
Carbohydrate binding family 6; InterProIPR013785:IPR017853:IPR008979:IPR017868:IPR 005084:IPR002241; KEGG: sma:SAV_1077 melibiase; PFAM: Carbohydrate binding family 6; SPTR: Q82P56 Putative alpha-galactosidase; PFAM: Melibiase; Carbohydrate binding module (family 6).
  
     0.508
Krac_2592
Protease-like protein; COGs: COG4934 protease; InterPro IPR000209; KEGG: cai:Caci_1999 protease-like protein; SPTR: C7QFU2 Protease-like protein.
  
     0.505
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.