STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_4673Tetratricopeptide TPR_2 repeat protein; InterPro IPR019734:IPR013026:IPR013105; KEGG: ttr:Tter_2712 hypothetical protein; PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; SPTR: D1CIM9 Putative uncharacterized protein; PFAM: Tetratricopeptide repeat. (241 aa)    
Predicted Functional Partners:
Krac_4672
InterPro IPR016196:IPR011701; KEGG: npu:Npun_F4674 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: B2IXX1 Major facilitator superfamily MFS_1; PFAM: Bacterial protein of unknown function (DUF894).
       0.457
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.