STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_4814Hypothetical protein; InterPro IPR010916; KEGG: rha:RHA1_ro02995 IclR family transcriptional regulator; SPTR: Q0SCD8 Probable transcriptional regulator, IclR family protein. (131 aa)    
Predicted Functional Partners:
Krac_4815
KEGG: tro:trd_A0481 hypothetical protein; SPTR: B9L3W7 Putative uncharacterized protein.
       0.773
Krac_4813
ATPase, P-type (transporting), HAD superfamily, subfamily IC; COGs: COG0474 Cation transport ATPase; InterProIPR006121:IPR001757:IPR000695:IPR018303:IPR 008250:IPR005834:IPR006068; KEGG: tro:trd_A0479 cation-transporting P-tyep ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; PRIAM: Calcium-transporting ATPase; SPTR: B9L3W5 Cation-transporting P-tyep ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cati [...]
       0.714
Krac_4812
Hypothetical protein; KEGG: chl:Chy400_3708 sodium/hydrogen exchanger; SPTR: B9LDV9 Sodium/hydrogen exchanger.
       0.420
Krac_4816
KEGG: hypothetical protein; SPTR: Q0CNA5 Putative uncharacterized protein.
       0.400
Krac_4817
Hypothetical protein.
       0.400
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.