STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_4963KEGG: dat:HRM2_19930 hypothetical protein; SPTR: B6GEM3 Putative uncharacterized protein (Fragment). (205 aa)    
Predicted Functional Partners:
Krac_4962
KEGG: rca:Rcas_3395 hypothetical protein; SPTR: C6HXI1 Putative uncharacterized protein.
       0.773
Krac_4964
KEGG: amr:AM1_D0217 hypothetical protein; SPTR: C6HXV0 Putative uncharacterized protein.
       0.664
Krac_4961
Inositol monophosphatase; COGs: COG0483 fructose-1 6-bisphosphatase of inositol monophosphatase family; InterPro IPR000760; KEGG: tro:trd_0178 inositol-1-monophosphatase; PFAM: inositol monophosphatase; SPTR: B9KXJ1 Inositol-1-monophosphatase; PFAM: Inositol monophosphatase family.
       0.493
Krac_4960
Cupin 2 conserved barrel domain protein; COGs: COG0662 Mannose-6-phosphate isomerase; InterPro IPR011051:IPR019780:IPR013096:IPR014710; KEGG: bcu:BCAH820_4739 YdbB; PFAM: Cupin 2 conserved barrel domain protein; SPTR: C3B8W1 Putative uncharacterized protein; PFAM: Cupin domain.
       0.457
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.