STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_5034ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: ttr:Tter_2251 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: D1CHC9 ABC transporter related protein; PFAM: ABC transporter. (266 aa)    
Predicted Functional Partners:
Krac_5033
ABC-2 type transporter; InterPro IPR000412:IPR013526:IPR013525; KEGG: ava:Ava_4150 hypothetical protein; PFAM: ABC-2 type transporter; SPTR: Q3M5I7 ABC-2; manually curated; PFAM: ABC-2 type transporter; TIGRFAM: daunorubicin resistance ABC transporter membrane protein.
 
 
  0.954
Krac_0437
ABC-2 type transporter; InterPro IPR013526:IPR000412:IPR013525; KEGG: sti:Sthe_2138 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: D1C612 ABC-2 type transporter; PFAM: ABC-2 type transporter; TIGRFAM: ABC-2 type transporter, NodJ family; daunorubicin resistance ABC transporter membrane protein.
 
 
  0.803
Krac_3228
ABC-2 type transporter; InterPro IPR000412:IPR013526:IPR013525; KEGG: dhd:Dhaf_1743 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: Q24RB7 Putative uncharacterized protein; PFAM: ABC-2 type transporter.
  
 
  0.788
Krac_5035
Transcriptional regulator, MarR family; InterPro IPR000835:IPR011991; KEGG: tro:trd_1076 possible transcriptional regulatory protein; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: B9L0K5 Possible transcriptional regulatory protein; PFAM: MarR family.
       0.773
Krac_1822
ABC-2 type transporter; COGs: COG0842 ABC-type multidrug transport system permease component; InterPro IPR013525:IPR013526:IPR000412; KEGG: dev:DhcVS_701 ABC transporter, permease protein; PFAM: ABC-2 type transporter; SPTR: A8CTV4 ABC-2 type transporter; PFAM: ABC-2 type transporter.
  
 
  0.745
Krac_8399
ABC-2 type transporter; COGs: COG0842 ABC-type multidrug transport system permease component; InterPro IPR013525:IPR000412; KEGG: tro:trd_A0354 ABC transporter, permease protein; PFAM: ABC-2 type transporter; SPTR: D1CAC1 ABC-2 type transporter; PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family.
 
 
  0.729
Krac_2397
ABC-2 type transporter; COGs: COG0842 ABC-type multidrug transport system permease component; InterPro IPR000412:IPR013525; KEGG: hau:Haur_1890 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: C3F1X5 Export ABC transporter permease protein; PFAM: ABC-2 type transporter.
  
 
  0.683
Krac_3487
ABC-2 type transporter; COGs: COG0842 ABC-type multidrug transport system permease component; InterPro IPR000412:IPR013525; KEGG: gvi:glr3473 hypothetical protein; PFAM: ABC-2 type transporter; SPTR: C3IC62 Export ABC transporter permease protein; PFAM: ABC-2 type transporter.
  
 
  0.595
Krac_5032
ATP-dependent transcriptional regulator, MalT-like, LuxR family; COGs: COG2909 ATP-dependent transcriptional regulator protein; InterPro IPR016032:IPR000792:IPR011990:IPR011991; KEGG: rca:Rcas_4327 ATP-dependent transcription regulator LuxR; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; SPTR: A7NS05 ATP-dependent transcriptional regulator, MalT-like, LuxR family; PFAM: Bacterial regulatory proteins, luxR family.
       0.468
Krac_7867
ABC-2 type transporter; InterPro IPR018062:IPR013525:IPR000412; KEGG: sti:Sthe_2180 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: D1C6I1 ABC-2 type transporter; PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family.
  
 
  0.453
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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