STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_5152UspA domain protein; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016:IPR006015:IPR014729; KEGG: chl:Chy400_2728 UspA domain protein; PFAM: UspA domain protein; SPTR: D1C8D8 UspA domain protein; PFAM: Universal stress protein family. (329 aa)    
Predicted Functional Partners:
Krac_5151
Monooxygenase FAD-binding; COGs: COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase; InterPro IPR002938:IPR012336:IPR003042; KEGG: cyc:PCC7424_2512 monooxygenase FAD-binding; PFAM: monooxygenase FAD-binding; SPTR: B4AVI0 Monooxygenase FAD-binding; PFAM: FAD binding domain.
       0.737
Krac_7646
Conserved hypothetical protein; COGs: COG0392 integral membrane protein; InterPro IPR005242; KEGG: hau:Haur_4436 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: A9AZ28 Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein.
  
     0.413
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.