STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_5154Hypothetical protein; KEGG: swd:Swoo_1352 ABC-type phosphate/phosphonate transport system periplasmic component-like protein; SPTR: B1KIZ6 ABC-type phosphate/phosphonate transport system periplasmic component-like protein. (272 aa)    
Predicted Functional Partners:
Krac_8832
COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR011006; KEGG: mxa:MXAN_4640 sensor histidine kinase/response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Q1D3G7 Sensor protein; PFAM: Response regulator receiver domain.
    
 0.725
Krac_9408
COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011006:IPR001789; KEGG: rmr:Rmar_0513 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: D0MEW5 Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain.
    
 0.723
EFH89805.1
Phosphonate metabolism PhnJ; COGs: COG3627 Uncharacterized protein of phosphonate metabolism; InterPro IPR010306; KEGG: rrs:RoseRS_1588 phosphonate metabolism PhnJ; PFAM: phosphonate metabolism PhnJ; SPTR: A5UTM7 Phosphonate metabolism PhnJ; PFAM: Phosphonate metabolism protein PhnJ.
  
  
 0.711
phnC
Phosphonate ABC transporter, ATPase subunit; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
  
 
 0.703
phnC-2
Phosphonate ABC transporter, ATPase subunit; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
  
 
 0.703
Krac_7294
Hypothetical protein; InterPro IPR003594; KEGG: mmx:MmarC6_1547 integral membrane sensor signal transduction histidine kinase; SPTR: A6EDD2 Sensor protein.
    
  0.674
EFH89594.1
COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR004358:IPR003594:IPR011006:IPR009082:IPR 000014:IPR005467:IPR001789:IPR000700:IPR013767; KEGG: sfu:Sfum_3112 putative PAS/PAC sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAS domain containing protein; SPTR: A0LMY3 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B [...]
    
  0.671
Krac_9512
COGs: COG5002 Signal transduction histidine kinase; InterProIPR003594:IPR009082:IPR013656:IPR003661:IPR 005467:IPR004358; KEGG: fba:FIC_01552 two-component system sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A6E9H1 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box.
    
 0.620
Krac_4829
COGs: COG0642 Signal transduction histidine kinase; InterProIPR003594:IPR009082:IPR005467:IPR000014:IPR 000700:IPR004358:IPR001610:IPR003661:IPR013656:IPR013655; KEGG: rlg:Rleg_6856 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: C8SDN7 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: [...]
    
  0.607
Krac_6285
COGs: COG0642 Signal transduction histidine kinase; InterProIPR003594:IPR011006:IPR009082:IPR001789:IPR 013655:IPR003661:IPR000014:IPR001610:IPR004358:IPR005467:I PR000700; KEGG: rlg:Rleg_6856 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-3 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein; SPTR: C8SDN7 PAS/PAC sensor sign [...]
    
  0.607
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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