STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_5287Protein of unknown function DUF2182; COGs: COG5486 metal-binding integral membrane protein; InterPro IPR018688; KEGG: bcu:BCAH820_B0266 hypothetical protein; PFAM: Protein of unknown function DUF2182, transmembrane, metal-binding; SPTR: B5HH83 Putative uncharacterized protein; PFAM: Predicted metal-binding integral membrane protein (DUF2182). (254 aa)    
Predicted Functional Partners:
Krac_5286
HNH endonuclease; InterPro IPR003615:IPR002711; KEGG: ana:all7277 hypothetical protein; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: B4VLS1 HNH endonuclease domain protein; PFAM: HNH endonuclease.
       0.664
Krac_0280
KEGG: nml:Namu_1612 hypothetical protein; SPTR: C8XFP3 Putative uncharacterized protein.
  
     0.623
Krac_8034
Putative F420-dependent enzyme; InterPro IPR009002:IPR011576:IPR019967; KEGG: rxy:Rxyl_0973 nitroreductase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; SPTR: D1C9H4 PPOX class putative F420-dependent enzyme; TIGRFAM: putative F420-dependent enzyme; PFAM: Pyridoxamine 5'-phosphate oxidase; TIGRFAM: PPOX class probable F420-dependent enzyme, Rv0121 family.
  
     0.469
Krac_2058
Phosphoesterase; InterPro IPR007312; KEGG: cai:Caci_6259 phosphoesterase; PFAM: phosphoesterase; SPTR: C7QK39 Phosphoesterase; PFAM: Phosphoesterase family.
  
     0.464
Krac_3961
Secreted hypothetical protein; KEGG: ach:Achl_3511 secreted repeat of unknown function; SPTR: B8HHH6 Putative uncharacterized protein; PFAM: Secreted repeat of unknown function.
  
     0.441
Krac_6790
Hydrolase; InterPro IPR000998; KEGG: sma:SAV_1224 hydrolase; SPTR: Q82NR7 Putative hydrolase; PFAM: MAM domain; Immune inhibitor A peptidase M6.
  
     0.440
Krac_5288
KEGG: lmh:LMHCC_2301 hypothetical protein; SPTR: B8DER7 Putative uncharacterized protein.
       0.401
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.