STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_5403Histidine triad (HIT) protein; InterPro IPR001310:IPR011146; KEGG: cai:Caci_5939 histidine triad (HIT) protein; SPTR: C7QF39 Histidine triad (HIT) protein; PFAM: HIT domain. (150 aa)    
Predicted Functional Partners:
Krac_0807
Helicase domain protein; COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family; InterPro IPR014021:IPR001650:IPR014001:IPR000330; KEGG: cyn:Cyan7425_5359 helicase domain protein; PFAM: helicase domain protein; SNF2-related protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: B4WK96 Helicase conserved C-terminal domain protein; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain.
   
 
  0.701
EFH88862.1
Helicase domain protein; InterPro IPR001650:IPR014001; KEGG: hau:Haur_2539 helicase domain-containing protein; PFAM: helicase domain protein; SMART: helicase domain protein; DEAD-like helicase; SPTR: A9B068 Helicase domain protein; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain.
  
 
  0.635
EFH88869.1
Hypothetical protein; KEGG: hau:Haur_2539 helicase domain-containing protein; SPTR: A9B068 Helicase domain protein.
  
 
  0.635
Krac_2478
Hypothetical protein; KEGG: hau:Haur_2539 helicase domain-containing protein; SPTR: A9B068 Helicase domain protein.
  
 
  0.635
Krac_5794
Hypothetical protein; KEGG: hau:Haur_2539 helicase domain-containing protein; SPTR: A9B068 Helicase domain protein.
  
 
  0.635
Krac_5872
KEGG: hau:Haur_2539 helicase domain-containing protein; SPTR: A9B068 Helicase domain protein.
  
 
  0.635
Krac_5402
KEGG: cef:CE0800 hypothetical protein; SPTR: Q8FRG1 Putative uncharacterized protein.
       0.458
Krac_5404
Protein of unknown function DUF347; COGs: COG4705 Uncharacterized membrane-anchored protein; InterPro IPR007136; KEGG: pfs:PFLU4956 hypothetical protein; PFAM: protein of unknown function DUF347; SPTR: C3K169 Putative membrane protein; PFAM: Repeat of Unknown Function (DUF347).
       0.451
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.