STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_5508DinB family protein; InterPro IPR007837; KEGG: sti:Sthe_0599 DinB family protein; PFAM: DinB family protein; SPTR: D1C1B9 DinB family protein; PFAM: DinB family. (160 aa)    
Predicted Functional Partners:
Krac_3464
Phospholipid/glycerol acyltransferase; InterPro IPR002123; KEGG: sti:Sthe_2077 protein of unknown function DUF422; PFAM: phospholipid/glycerol acyltransferase; SPTR: D1C5V4 Putative uncharacterized protein; PFAM: Acyltransferase.
  
     0.542
Krac_0246
InterPro IPR012337; KEGG: sti:Sthe_2251 hypothetical protein; SPTR: D1C6P8 Putative uncharacterized protein.
  
     0.512
Krac_9769
Transposase IS4 family protein; InterPro IPR012337:IPR003531:IPR002559; KEGG: sti:Sthe_2251 hypothetical protein; PFAM: transposase IS4 family protein; SPTR: D1C6P8 Putative uncharacterized protein; PFAM: Transposase DDE domain.
  
     0.512
Krac_1208
Transposase IS4 family protein; InterPro IPR002559:IPR003531:IPR012337; KEGG: sti:Sthe_2251 hypothetical protein; PFAM: transposase IS4 family protein; SPTR: D1C6P8 Putative uncharacterized protein; PFAM: Transposase DDE domain.
  
     0.500
Krac_6572
Transposase IS4 family protein; InterPro IPR012337:IPR003531:IPR002559; KEGG: sti:Sthe_2251 hypothetical protein; PFAM: transposase IS4 family protein; SPTR: D1C6P8 Putative uncharacterized protein; PFAM: Transposase DDE domain.
  
     0.500
Krac_6914
Transposase IS4 family protein; InterPro IPR012337:IPR003531:IPR002559; KEGG: sti:Sthe_2251 hypothetical protein; PFAM: transposase IS4 family protein; SPTR: D1C6P8 Putative uncharacterized protein; PFAM: Transposase DDE domain.
  
     0.500
EFH90137.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sti:Sthe_0150 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: D1C651 Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1.
  
     0.450
Krac_3730
Hypothetical protein; InterPro IPR012337; KEGG: sti:Sthe_2251 hypothetical protein; SPTR: D1C6P8 Putative uncharacterized protein.
  
     0.450
Krac_6009
Luciferase-like monooxygenase; COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR011251; KEGG: sti:Sthe_1924 luciferase-like monooxygenase; SPTR: D1C539 Luciferase-like monooxygenase; PFAM: Luciferase-like monooxygenase; TIGRFAM: F420-dependent oxidoreductase, MSMEG_4879 family.
  
     0.429
Krac_6399
Transposase IS4 family protein; InterPro IPR012337:IPR002559; KEGG: sti:Sthe_2251 hypothetical protein; PFAM: transposase IS4 family protein; SPTR: D1C6P8 Putative uncharacterized protein; PFAM: Transposase DDE domain.
  
     0.420
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.