STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_5708Glyoxalase/bleomycin resistance protein/dioxygenase; COGs: COG2764 conserved hypothetical protein; InterPro IPR004360; KEGG: gym:GYMC10_1135 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Q0SG73 Putative uncharacterized protein. (169 aa)    
Predicted Functional Partners:
Krac_0189
Cytidyltransferase-related domain protein; COGs: COG3172 ATPase/kinase involved in NAD metabolism; InterPro IPR004821:IPR014729:IPR016429; KEGG: mbt:JTY_0218 putative transcriptional regulatory protein; SPTR: Q7U2K1 POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN NADR (PROBABLY ASNC-FAMILY); TIGRFAM: cytidyltransferase-related domain protein; TIGRFAM: nicotinamide-nucleotide adenylyltransferase, NadR type; cytidyltransferase-related domain.
   
    0.640
Krac_3009
Hypothetical protein; KEGG: gym:GYMC10_6274 cytidyltransferase-related domain protein; SPTR: A6G9I1 Putative uncharacterized protein.
   
    0.640
Krac_7924
KEGG: dfe:Dfer_0410 hypothetical protein; SPTR: C6VYK0 Putative uncharacterized protein; PFAM: Mycothiol maleylpyruvate isomerase N-terminal domain; TIGRFAM: uncharacterized Actinobacterial protein TIGR03083.
  
     0.428
Krac_5709
Protein of unknown function DUF1680; COGs: COG3533 conserved hypothetical protein; InterPro IPR012878; KEGG: rrs:RoseRS_3545 hypothetical protein; PFAM: protein of unknown function DUF1680; SPTR: A5UZ50 Putative uncharacterized protein; PFAM: Putative glycosyl hydrolase of unknown function (DUF1680).
       0.400
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.