STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_5914COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: bcv:Bcav_0320 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C5BWC6 Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component. (295 aa)    
Predicted Functional Partners:
Krac_5913
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: bcv:Bcav_0321 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C5BWC7 Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
  0.960
EFH90569.1
ABC transporter related protein; COGs: COG3839 ABC-type sugar transport systems ATPase components; InterProIPR008995:IPR003439:IPR017871:IPR005116:IPR 003593; KEGG: ate:Athe_1803 ABC transporter related; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; SPTR: B9MKN8 ABC transporter related; PFAM: ABC transporter; TOBE domain.
 0.883
Krac_5912
Extracellular solute-binding protein family 1; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: bcv:Bcav_0322 extracellular solute-binding protein family 1; PFAM: extracellular solute-binding protein family 1; SPTR: C5BWC8 Extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding protein.
 
  0.861
EFH88823.1
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: ttr:Tter_1290 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C9ZBD9 Putative binding protein dependent transport protein; PFAM: Binding-protein-dependent transport system inner membrane component.
 
  0.851
EFH89945.1
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: ttr:Tter_2041 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: D1CGS4 Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
  0.851
Krac_1284
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: kol:Kole_1993 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C5CH70 Binding-protein-dependent transport systems inner membrane component.
  
  0.851
Krac_1292
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: aau:AAur_0686 putative ABC-type sugar transport systems, permease components; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1WI93 Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component.
 
  0.851
Krac_1987
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: aac:Aaci_2047 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C8WQB4 Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
  0.851
Krac_2210
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: gym:GYMC10_1688 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: D1CI41 Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
  0.851
Krac_3030
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: bcv:Bcav_3942 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C5C543 Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
  0.851
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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