STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_5977COGs: COG3501 conserved hypothetical protein; KEGG: scl:sce2095 hypothetical protein; SPTR: A9FVA4 Putative uncharacterized protein; PFAM: Phage-related baseplate assembly protein. (169 aa)    
Predicted Functional Partners:
Krac_5976
KEGG: scl:sce2094 hypothetical protein; SPTR: A9FVA2 Putative uncharacterized protein.
 
  
 0.968
Krac_5979
KEGG: scl:sce2097 hypothetical protein; SPTR: A9FVB0 Hypothetical protein; PFAM: Gene 25-like lysozyme.
 
  
 0.963
Krac_5980
InterPro IPR011749; KEGG: bra:BRADO4377 hypothetical protein; SPTR: A4YW45 Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein, phage tail-like region.
 
   
 0.957
Krac_5981
InterPro IPR011749; KEGG: bra:BRADO4376 hypothetical protein; SPTR: A4YW44 Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein, phage tail-like region.
 
 
 0.951
Krac_5982
KEGG: bra:BRADO4375 hypothetical protein; SPTR: A4YW43 Putative uncharacterized protein.
 
     0.951
Krac_5975
KEGG: scl:sce2093 hypothetical protein; SPTR: A9FV98 Putative uncharacterized protein.
 
    0.948
Krac_5974
KEGG: scl:sce2092 hypothetical protein; SPTR: A9FV96 Putative uncharacterized protein.
 
     0.945
Krac_5983
KEGG: bra:BRADO4374 hypothetical protein; SPTR: A4YW42 Putative uncharacterized protein.
 
   
 0.933
Krac_5966
InterPro IPR011747; KEGG: scl:sce2086 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: A9FV76 Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein; PFAM: T4-like virus tail tube protein gp19; TIGRFAM: conserved hypothetical phage tail region protein.
 
  
 0.911
Krac_5965
COGs: COG3497 Phage tail sheath protein FI; InterPro IPR007067; KEGG: nha:Nham_0832 phage tail sheath protein; PFAM: tail sheath protein; SPTR: B9Z3L7 Tail sheath protein; PFAM: Phage tail sheath protein.
 
   
 0.898
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.