STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_6028KEGG: rle:RL2344 hypothetical protein; SPTR: Q1MGT4 Putative uncharacterized protein. (178 aa)    
Predicted Functional Partners:
Krac_6027
Serine/threonine protein kinase; COGs: COG0050 GTPase - translation elongation factors; InterProIPR017441:IPR011009:IPR009000:IPR009001:IPR 000719:IPR017442:IPR004161:IPR004160:IPR020635:IPR002290; KEGG: pth:PTH_0318 elongation factor Tu; PFAM: elongation factor Tu domain protein; Serine/threonine-protein kinase-like domain; elongation factor Tu domain 2 protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; SPTR: A5D5I8 Elongation factor Tu 2; PFAM: Protein kinase domain; Elongation factor Tu C-terminal domain; Elongation factor Tu domain [...]
       0.494
recD2-3
Helicase, RecD/TraA family; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.
       0.443
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.