STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_6085KEGG: xau:Xaut_3598 hypothetical protein; SPTR: B4CVT3 Putative uncharacterized protein. (167 aa)    
Predicted Functional Partners:
Krac_6086
Hypothetical protein; KEGG: bur:Bcep18194_B1042 phage terminase GpA; SPTR: Q398F5 Phage terminase GpA.
       0.553
Krac_6087
Hypothetical protein; InterPro IPR019734:IPR013026:IPR011990; KEGG: cyn:Cyan7425_2135 tetratricopeptide TPR_2 repeat protein; SPTR: B8HUF1 Tetratricopeptide TPR_2 repeat protein.
       0.553
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.