STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_6173MmgE/PrpD family protein; COGs: COG2079 Uncharacterized protein involved in propionate catabolism; InterPro IPR005656; KEGG: cti:RALTA_B0532 conserved hypothetical protein, putative enzyme MmgE/PrpD family; PFAM: MmgE/PrpD family protein; SPTR: B3R8N5 Putative uncharacterized protein; PFAM: MmgE/PrpD family. (462 aa)    
Predicted Functional Partners:
Krac_6176
L-carnitine dehydratase/bile acid-inducible protein F; COGs: COG1804 acyl-CoA transferase/carnitine dehydratase; InterPro IPR003673; KEGG: sti:Sthe_1793 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; SPTR: D1C4Q9 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III.
 
 
  0.813
Krac_0552
COGs: COG0372 Citrate synthase; InterPro IPR002020:IPR016142:IPR016141:IPR009061; KEGG: rxy:Rxyl_2556 citrate synthase; PFAM: Citrate synthase; SPTR: Q1AT05 Citrate synthase; PFAM: Citrate synthase; TIGRFAM: DNA binding domain, excisionase family.
  
 
 0.791
EFH90271.1
2-methylcitrate synthase/citrate synthase II; COGs: COG0372 Citrate synthase; InterProIPR016142:IPR002020:IPR016141:IPR011278:IPR 019810; KEGG: aac:Aaci_2221 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase; PRIAM: Citrate (Si)-synthase; SPTR: B7DSK4 2-methylcitrate synthase/citrate synthase II; TIGRFAM: 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase; TIGRFAM: 2-methylcitrate synthase/citrate synthase II; Belongs to the citrate synthase family.
  
 
 0.791
Krac_8721
COGs: COG0372 Citrate synthase; InterPro IPR016142:IPR002020:IPR016141:IPR019810; KEGG: bbe:BBR47_04310 citrate synthase; PFAM: Citrate synthase; PRIAM: Citrate (Si)-synthase; SPTR: C0ZJV7 Citrate synthase; PFAM: Citrate synthase; TIGRFAM: 2-methylcitrate synthase/citrate synthase II; Belongs to the citrate synthase family.
  
 
 0.791
Krac_2452
Protein of unknown function DUF453; COGs: COG2828 conserved hypothetical protein; InterPro IPR007400; KEGG: vap:Vapar_4311 protein of unknown function DUF453; PFAM: protein of unknown function DUF453; SPTR: Q0QLE6 3-methylitaconate isomerase; PFAM: PrpF protein.
 
  0.790
Krac_6174
MaoC domain protein dehydratase; COGs: COG2030 Acyl dehydratase; InterPro IPR002539; KEGG: sti:Sthe_1792 MaoC domain protein dehydratase; PFAM: MaoC domain protein dehydratase; SPTR: D1C4Q8 MaoC domain protein dehydratase; PFAM: MaoC like domain.
       0.773
Krac_6177
COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR009100:IPR009075:IPR006092:IPR006091:IPR 006090:IPR006089:IPR013786:IPR013764; KEGG: sti:Sthe_1794 acyl-CoA dehydrogenase domain protein; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: D1C4R0 Acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.
 
    0.758
EFH90570.1
COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterProIPR016040:IPR008927:IPR013328:IPR006176:IPR 006108:IPR001753; KEGG: chy:CHY_1609 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/isomerase family protein; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; Enoyl-CoA hydratase/isomerase; SPTR: Q3ABP7 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/isomerase family protein; PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
  
 
  0.756
EFH90678.1
Isocitrate lyase and phosphorylmutase; COGs: COG2513 PEP phosphonomutase; InterPro IPR018523:IPR000918:IPR015813; KEGG: nth:Nther_2154 carboxyvinyl-carboxyphosphonate phosphorylmutase; PFAM: isocitrate lyase and phosphorylmutase; SPTR: C0D4F3 Putative uncharacterized protein; PFAM: Isocitrate lyase family; TIGRFAM: carboxyvinyl-carboxyphosphonate phosphorylmutase.
 
  
 0.723
Krac_2457
Isocitrate lyase and phosphorylmutase; COGs: COG2513 PEP phosphonomutase; InterPro IPR015813:IPR018523:IPR000918; KEGG: nth:Nther_2154 carboxyvinyl-carboxyphosphonate phosphorylmutase; PFAM: isocitrate lyase and phosphorylmutase; SPTR: B0PCL5 Putative uncharacterized protein; PFAM: Isocitrate lyase family; TIGRFAM: carboxyvinyl-carboxyphosphonate phosphorylmutase.
 
  
 0.717
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.