STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_6243Hypothetical protein; KEGG: cpy:Cphy_2838 multi-sensor hybrid histidine kinase; SPTR: A9KP28 Sensor protein. (66 aa)    
Predicted Functional Partners:
Krac_6242
Endoribonuclease L-PSP; COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR013813:IPR006175; KEGG: mma:MM_0502 translation initiation inhibitor; PFAM: Endoribonuclease L-PSP; SPTR: Q8PZJ0 Translation initiation inhibitor; PFAM: Endoribonuclease L-PSP.
       0.551
Krac_6244
KEGG: rci:RRC399 hypothetical protein; SPTR: Q4SQB7 Chromosome 4 SCAF14533, whole genome shotgun sequence. (Fragment).
       0.464
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.