STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
Krac_6685Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; COGs: COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs; InterPro IPR008274:IPR000674; KEGG: tro:trd_A0400 xanthine dehydrogenase molybdenum-binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; SPTR: D1C9T8 Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b h [...] (777 aa)    
Predicted Functional Partners:
Krac_6346
(2Fe-2S)-binding domain protein; COGs: COG1319 Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM/CutM homologs; InterProIPR016166:IPR002888:IPR005107:IPR001041:IPR 002346:IPR006058:IPR016169:IPR012675; KEGG: dka:DKAM_0739 molybdopterin dehydrogenase FAD-binding; PFAM: [2Fe-2S]-binding domain protein; molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; ferredoxin; SPTR: B8D4N4 Molybdopterin dehydrogenase FAD-binding; PFAM: 2Fe-2S iron-sulfur cluster binding domain; FAD binding domain in molybdopterin dehydrogenase; [2Fe-2S] binding domain; [...]
 0.999
EFH89046.1
(2Fe-2S)-binding domain protein; COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterPro IPR001041:IPR002888:IPR012675; KEGG: cag:Cagg_0972 (2Fe-2S)-binding domain protein; PFAM: [2Fe-2S]-binding domain protein; ferredoxin; SPTR: B8G6F3 (2Fe-2S)-binding domain protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain.
 
  0.987
Krac_2433
(2Fe-2S)-binding domain protein; COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterPro IPR012675:IPR001041:IPR006058:IPR002888; KEGG: reu:Reut_B3596 ferredoxin:(2Fe-2S)-binding; PFAM: [2Fe-2S]-binding domain protein; ferredoxin; SPTR: Q565Y1 4-hydroxybenzoyl-CoA reductase alpha/gamma subunit (HcrC/hcrA); PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain.
 
  0.987
Krac_7016
(2Fe-2S)-binding domain protein; COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterPro IPR002888:IPR001041:IPR006058:IPR012675; KEGG: amt:Amet_4570 2Fe-2S iron-sulfur cluster binding domain-containing protein; PFAM: [2Fe-2S]-binding domain protein; ferredoxin; SPTR: A6TWS3 (2Fe-2S)-binding domain protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain.
 
  0.987
Krac_6954
(2Fe-2S)-binding domain protein; COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterPro IPR002888:IPR001041:IPR012675; KEGG: tro:trd_A0565 [2Fe-2S] binding domain protein; PFAM: [2Fe-2S]-binding domain protein; ferredoxin; SPTR: D1C8P8 (2Fe-2S)-binding domain protein; PFAM: [2Fe-2S] binding domain.
 
  0.984
EFH89264.1
(2Fe-2S)-binding domain protein; COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterProIPR001041:IPR012675:IPR016160:IPR006058:IPR 002888; KEGG: mea:Mex_1p3922 oxidoreductase, 2Fe-2S subunit; PFAM: [2Fe-2S]-binding domain protein; ferredoxin; SPTR: C5B0L9 Oxidoreductase, 2Fe-2S subunit; PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain.
 
  0.891
EFH89048.1
Molybdopterin dehydrogenase FAD-binding; COGs: COG1319 Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM/CutM homologs; InterProIPR019793:IPR002346:IPR005107:IPR016166:IPR 016167:IPR016169; KEGG: tro:trd_1208 carbon monoxide dehydrogenase medium chain; PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; SPTR: B9L1E9 Carbon monoxide dehydrogenase medium chain; PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain.
 
  0.859
Krac_6955
Molybdopterin dehydrogenase FAD-binding; COGs: COG1319 Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM/CutM homologs; InterProIPR016166:IPR005107:IPR019793:IPR016167:IPR 016169:IPR002346; KEGG: tro:trd_A0566 nicotine dehydrogenase chain A; PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; SPTR: B9L452 Nicotine dehydrogenase chain A; PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain.
  
  0.859
Krac_7013
Molybdopterin dehydrogenase FAD-binding; COGs: COG1319 Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM/CutM homologs; InterProIPR016166:IPR005107:IPR016167:IPR016169:IPR 002346; KEGG: reh:H16_B0744 4-hydroxybenzoyl-CoA reductase FAD-binding subunit B; PFAM: molybdopterin dehydrogenase FAD-binding; SPTR: Q0K383 4-Hydroxybenzoyl-CoA reductase, FAD-binding subunit B; PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain.
  
  0.859
Krac_2435
Molybdopterin dehydrogenase FAD-binding; COGs: COG1319 Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM/CutM homologs; InterProIPR016167:IPR016169:IPR005107:IPR016166:IPR 002346; KEGG: eba:ebA3602 4-hydroxybenzoyl-CoA reductase, beta subunit; PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; SPTR: Q5P3F4 4-hydroxybenzoyl-CoA reductase, beta subunit; PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain; TIGRFAM: 4-hydroxybenzoyl-CoA reductase, beta subunit.
 
  0.852
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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