STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_6777Protein of unknown function DUF1963; COGs: COG3878 conserved hypothetical protein; InterPro IPR015315; KEGG: pjd:Pjdr2_0749 protein of unknown function DUF1963; PFAM: Protein of unknown function DUF1963; SPTR: C6CT90 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1963). (281 aa)    
Predicted Functional Partners:
Krac_6776
KEGG: min:Minf_0834 hypothetical protein; SPTR: B3E193 Putative uncharacterized protein.
       0.601
Krac_6778
COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR011006; KEGG: scl:sce1190 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Q09C85 Two-component system sensory histidine kinase; PFAM: Response regulator receiver domain.
       0.558
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.