STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Krac_6780Putative F420-dependent oxidoreductase; COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR019952:IPR011251:IPR016048; KEGG: ttr:Tter_0454 luciferase-like monooxygenase; PFAM: Luciferase-like, subgroup; SPTR: D1CEL9 Luciferase-like monooxygenase; TIGRFAM: putative F420-dependent oxidoreductase; PFAM: Luciferase-like monooxygenase; TIGRFAM: probable F420-dependent oxidoreductase, Rv1855c family. (320 aa)    
Predicted Functional Partners:
Krac_6972
Amino acid adenylation domain protein; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR010071:IPR009081:IPR006162:IPR020845:IPR 001242:IPR000873:IPR006163:IPR001031; KEGG: ava:Ava_1611 amino acid adenylation; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Thioesterase; SPTR: Q3MCQ2 Amino acid adenylation; TIGRFAM: amino acid adenylation domain protein; PFAM: Thioesterase domain; Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain.
   
 0.835
Krac_1631
Luciferase-like, subgroup; COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR016048:IPR011251; KEGG: sti:Sthe_1924 luciferase-like monooxygenase; PFAM: Luciferase-like, subgroup; SPTR: D1C539 Luciferase-like monooxygenase; PFAM: Luciferase-like monooxygenase.
  
     0.759
Krac_3848
Luciferase-like, subgroup; COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR011251:IPR016048; KEGG: sti:Sthe_1924 luciferase-like monooxygenase; PFAM: Luciferase-like, subgroup; SPTR: D1C539 Luciferase-like monooxygenase; manually curated; PFAM: Luciferase-like monooxygenase.
  
     0.758
Krac_5231
Luciferase-like, subgroup; COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR016048:IPR011251; KEGG: sti:Sthe_1924 luciferase-like monooxygenase; PFAM: Luciferase-like, subgroup; SPTR: D1C539 Luciferase-like monooxygenase; PFAM: Luciferase-like monooxygenase.
  
     0.749
Krac_5842
Luciferase-like, subgroup; COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR011251:IPR016048; KEGG: tro:trd_1546 luciferase-like monooxygenase superfamily; PFAM: Luciferase-like, subgroup; SPTR: B9L054 Luciferase-like monooxygenase superfamily; PFAM: Luciferase-like monooxygenase.
  
     0.749
Krac_0370
Luciferase-like, subgroup; COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR011251:IPR016048; KEGG: rxy:Rxyl_0972 luciferase-like protein; PFAM: Luciferase-like, subgroup; SPTR: Q1AXD9 Luciferase-like protein; PFAM: Luciferase-like monooxygenase.
  
     0.746
Krac_2411
Thioesterase; COGs: COG3319 Thioesterase domains of type I polyketide synthase or non-ribosomal peptide synthetase; InterPro IPR001031; KEGG: ara:Arad_7635 non-ribosomal peptide synthetase; PFAM: Thioesterase; SPTR: B4CW24 Amino acid adenylation domain protein; PFAM: Thioesterase domain.
   
 0.726
Krac_2859
Luciferase-like, subgroup; COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR011251:IPR016048; KEGG: sti:Sthe_1924 luciferase-like monooxygenase; PFAM: Luciferase-like, subgroup; SPTR: D1C539 Luciferase-like monooxygenase; PFAM: Luciferase-like monooxygenase; TIGRFAM: F420-dependent oxidoreductase, MSMEG_4879 family.
  
     0.724
Krac_6009
Luciferase-like monooxygenase; COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR011251; KEGG: sti:Sthe_1924 luciferase-like monooxygenase; SPTR: D1C539 Luciferase-like monooxygenase; PFAM: Luciferase-like monooxygenase; TIGRFAM: F420-dependent oxidoreductase, MSMEG_4879 family.
  
     0.704
Krac_7306
Luciferase-like monooxygenase superfamily; COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR011251; KEGG: tro:trd_1546 luciferase-like monooxygenase superfamily; SPTR: B9L054 Luciferase-like monooxygenase superfamily; PFAM: Luciferase-like monooxygenase; TIGRFAM: F420-dependent oxidoreductase, MSMEG_4879 family.
  
     0.702
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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