STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_6919Protein of unknown function DUF218; InterPro IPR003848; KEGG: cch:Cag_1489 hypothetical protein; PFAM: protein of unknown function DUF218; SPTR: Q3AQI0 Putative uncharacterized protein; PFAM: DUF218 domain. (239 aa)    
Predicted Functional Partners:
Krac_6920
KEGG: cja:CJA_2404 flavodoxin FldB.
       0.705
Krac_6921
PHP domain protein; COGs: COG0613 metal-dependent phosphoesterase (PHP family); InterPro IPR003141:IPR016195:IPR004013; KEGG: hau:Haur_2208 phosphotransferase domain-containing protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; SPTR: A9AX40 PHP domain protein; PFAM: PHP domain.
       0.598
Krac_6922
NUDIX hydrolase; InterPro IPR015797:IPR000086; KEGG: tte:TTE1310 NTP pyrophosphohydrolase including oxidative damage repair enzyme; PFAM: NUDIX hydrolase; SPTR: B5H9S3 Putative uncharacterized protein; PFAM: NUDIX domain; Protein of unknown function (DUF1273).
       0.588
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.