STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_6938Transcriptional regulator, XRE family; InterPro IPR010982:IPR001387; KEGG: chl:Chy400_2323 transcriptional regulator, XRE family; SPTR: B9LHZ9 Transcriptional regulator, XRE family. (80 aa)    
Predicted Functional Partners:
Krac_6937
Transcriptional regulator, XRE family; InterPro IPR001387:IPR010982; KEGG: llm:llmg_0681 hypothetical protein; SMART: helix-turn-helix domain protein; SPTR: A5WD97 Putative transcriptional regulator, XRE family.
       0.448
Krac_6939
KEGG: bqu:BQ10660 hypothetical protein; SPTR: Q8D846 Methyl-accepting chemotaxis protein.
       0.435
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.