STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
Krac_6952Protein of unknown function DUF182; COGs: COG1975 Xanthine and CO dehydrogenase maturation factor XdhC/CoxF family; InterPro IPR011017:IPR009078:IPR003777:IPR007029; KEGG: tro:trd_A0563 xanthine dehydrogenase accessory factor, putative subfamily, putative; PFAM: protein of unknown function DUF182; YHS domain protein; SMART: TRASH domain protein; SPTR: D1C8P6 Putative uncharacterized protein; PFAM: YHS domain; XdhC and CoxI family. (320 aa)    
Predicted Functional Partners:
Krac_6346
(2Fe-2S)-binding domain protein; COGs: COG1319 Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM/CutM homologs; InterProIPR016166:IPR002888:IPR005107:IPR001041:IPR 002346:IPR006058:IPR016169:IPR012675; KEGG: dka:DKAM_0739 molybdopterin dehydrogenase FAD-binding; PFAM: [2Fe-2S]-binding domain protein; molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; ferredoxin; SPTR: B8D4N4 Molybdopterin dehydrogenase FAD-binding; PFAM: 2Fe-2S iron-sulfur cluster binding domain; FAD binding domain in molybdopterin dehydrogenase; [2Fe-2S] binding domain; [...]
 
 
 0.964
Krac_7964
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; COGs: COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs; InterProIPR006058:IPR019793:IPR008274:IPR000674:IPR 002888:IPR001041:IPR012675; KEGG: nca:Noca_1634 xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; [2Fe-2S]-binding domain protein; ferredoxin; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; SPTR: A1SH62 Xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: Molybdopter [...]
 
 
 0.932
Krac_6955
Molybdopterin dehydrogenase FAD-binding; COGs: COG1319 Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM/CutM homologs; InterProIPR016166:IPR005107:IPR019793:IPR016167:IPR 016169:IPR002346; KEGG: tro:trd_A0566 nicotine dehydrogenase chain A; PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; SPTR: B9L452 Nicotine dehydrogenase chain A; PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain.
 
 
 0.926
Krac_6954
(2Fe-2S)-binding domain protein; COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterPro IPR002888:IPR001041:IPR012675; KEGG: tro:trd_A0565 [2Fe-2S] binding domain protein; PFAM: [2Fe-2S]-binding domain protein; ferredoxin; SPTR: D1C8P8 (2Fe-2S)-binding domain protein; PFAM: [2Fe-2S] binding domain.
 
 
 0.915
Krac_6840
COGs: COG2068 Uncharacterized MobA-related protein; InterPro IPR001228; KEGG: geo:Geob_0102 molybdenum hydroxylase accessory protein, YgfJ family; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; SPTR: B9M8E1 Molybdenum hydroxylase accessory protein, YgfJ family; PFAM: Uncharacterized protein family UPF0007.
 
 
 0.912
Krac_6953
COGs: COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs; InterPro IPR012780:IPR008274:IPR000674; KEGG: tro:trd_A0564 carbon-monoxide dehydrogenase, large subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; SPTR: D1C8P7 Carbon-monoxide dehydrogenase, large subunit; TIGRFAM: carbon-monoxide dehydrogenase, large subunit; PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; TIGRFAM: carbon-mo [...]
 
 
  0.908
Krac_7057
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; COGs: COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs; InterProIPR008274:IPR000674:IPR002888:IPR001041:IPR 006058:IPR012675; KEGG: pna:Pnap_2695 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; [2Fe-2S]-binding domain protein; ferredoxin; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; SPTR: A1VQR9 Xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: Molybdopterin-bi [...]
 
 
 0.894
Krac_6951
Carbon monoxide dehydrogenase subunit G; COGs: COG3427 conserved hypothetical protein; InterPro IPR010419; KEGG: mrd:Mrad2831_5862 carbon monoxide dehydrogenase subunit G; PFAM: carbon monoxide dehydrogenase subunit G; SPTR: C1XF96 Uncharacterized conserved protein; PFAM: Carbon monoxide dehydrogenase subunit G (CoxG).
 
     0.845
EFH89046.1
(2Fe-2S)-binding domain protein; COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterPro IPR001041:IPR002888:IPR012675; KEGG: cag:Cagg_0972 (2Fe-2S)-binding domain protein; PFAM: [2Fe-2S]-binding domain protein; ferredoxin; SPTR: B8G6F3 (2Fe-2S)-binding domain protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain.
 
 
 0.818
EFH89963.1
Oxidoreductase FAD-binding domain protein; COGs: COG1018 Flavodoxin reductase (ferredoxin-NADPH reductase) family 1; InterProIPR001041:IPR017938:IPR017927:IPR001221:IPR 001709:IPR008333:IPR001433:IPR012675:IPR006058; KEGG: mkm:Mkms_0329 ferredoxin; PFAM: Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; ferredoxin; SPTR: Q1BF94 Ferredoxin; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain.
  
 
 0.817
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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