STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_7087Transposase, IS605 OrfB family; COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR010095; KEGG: dge:Dgeo_0928 transposase, IS605 OrfB; PFAM: transposase IS605 OrfB; SPTR: Q1IZV4 Transposase, IS605 OrfB; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region; transposase, putative, N-terminal domain. (410 aa)    
Predicted Functional Partners:
Krac_0347
Transposase IS605 OrfB; COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR001959:IPR010095; KEGG: drm:Dred_0877 IS605 family transposase OrfB; PFAM: transposase IS605 OrfB; putative transposase IS891/IS1136/IS1341 family; SPTR: A4J2W1 Transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase.
  
     0.772
Krac_7086
KEGG: cvi:CV_1208 hypothetical protein; SPTR: Q7NYR5 Putative uncharacterized protein.
       0.558
Krac_7085
Abortive infection protein; InterPro IPR017853; KEGG: mpl:Mpal_1411 abortive infection protein; SPTR: B8GI00 Abortive infection protein.
       0.432
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.