STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_7116COGs: COG5297 Cellobiohydrolase A (1 4-beta-cellobiosidase A); InterProIPR001919:IPR012291:IPR016288:IPR001524:IPR 008965; KEGG: hau:Haur_2136 glycoside hydrolase family protein; PFAM: 1, 4-beta cellobiohydrolase; cellulose-binding family II; SMART: cellulose-binding family II; SPTR: A9AWC6 Glycoside hydrolase family 6; PFAM: Cellulose binding domain; Glycosyl hydrolases family 6; Belongs to the glycosyl hydrolase family 6. (637 aa)    
Predicted Functional Partners:
Krac_9959
Glycoside hydrolase family 5; COGs: COG2730 Endoglucanase; InterProIPR017853:IPR008965:IPR001956:IPR013781:IPR 018087:IPR001547; KEGG: ace:Acel_0614 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 5; type 3a cellulose-binding domain protein; SPTR: P54583 Endoglucanase E1; PFAM: Cellulose binding domain; Cellulase (glycosyl hydrolase family 5).
 
 0.921
Krac_0976
Glycoside hydrolase family 5; COGs: COG2730 Endoglucanase; InterProIPR001956:IPR013781:IPR018087:IPR017853:IPR 008965:IPR001547; KEGG: ace:Acel_0614 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 5; type 3a cellulose-binding domain protein; SPTR: P54583 Endoglucanase E1; PFAM: Cellulose binding domain; Cellulase (glycosyl hydrolase family 5).
 
 0.886
Krac_4369
Type 3a cellulose-binding domain protein; InterPro IPR001956:IPR008965; KEGG: ace:Acel_0616 cellulose-binding family II protein; PFAM: type 3a cellulose-binding domain protein; SPTR: Q9L8L8 Beta-1,4-xylanase XynA; PFAM: Cellulose binding domain.
  
  0.877
Krac_4783
Glycoside hydrolase family 16; InterPro IPR008985:IPR000757:IPR013320; KEGG: ace:Acel_0129 carbohydrate-binding family 6 protein; PFAM: glycoside hydrolase family 16; SPTR: Q2HR46 Putative endo-1,3-beta-glucanase; PFAM: Glycosyl hydrolases family 16.
 
  
 0.814
Krac_2745
Carbohydrate-binding family V/XII; InterPro IPR003610:IPR017853; KEGG: cai:Caci_5624 chitinase; PFAM: Carbohydrate-binding family V/XII; SMART: Carbohydrate-binding family V/XII; SPTR: C7QB10 Chitinase; PFAM: Carbohydrate binding domain.
  
  
 0.802
Krac_2531
Glycoside hydrolase family 18; COGs: COG3469 Chitinase; InterProIPR013781:IPR011583:IPR001579:IPR017853:IPR 008979:IPR003305:IPR001223; KEGG: ami:Amir_1220 carbohydrate-binding CenC domain protein; PFAM: glycoside hydrolase family 18; Carbohydrate-binding CenC domain protein; SMART: chitinase II; SPTR: C6WRC0 Carbohydrate-binding CenC domain protein; PFAM: Glycosyl hydrolases family 18; Carbohydrate binding domain; Belongs to the glycosyl hydrolase 18 family.
  
  
 0.793
Krac_8829
Cellulose-binding family II; COGs: COG3534 Alpha-L-arabinofuranosidase; InterPro IPR017853; KEGG: cai:Caci_6640 cellulose-binding family II; SPTR: C7PZZ3 Cellulose-binding family II.
  
   
 0.775
Krac_5327
COGs: COG3934 Endo-beta-mannanase; InterProIPR017909:IPR001547:IPR017853:IPR013781:IPR 006311; KEGG: ttr:Tter_2698 glycoside hydrolase family 5; PFAM: glycoside hydrolase family 5; PRIAM: Mannan endo-1,4-beta-mannosidase; SPTR: D1CIL5 Glycoside hydrolase family 5; PFAM: Cellulase (glycosyl hydrolase family 5); TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
  0.771
Krac_9366
Endo-1,4-beta-xylanase; COGs: COG3693 Beta-1 4-xylanase; InterPro IPR013781:IPR017853:IPR001000; KEGG: ttr:Tter_1479 endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; PRIAM: Endo-1,4-beta-xylanase; SMART: glycoside hydrolase family 10; SPTR: D1CC70 Endo-1,4-beta-xylanase; PFAM: Glycosyl hydrolase family 10.
 
     0.742
Krac_4779
Coagulation factor 5/8 type domain protein; InterProIPR017853:IPR008979:IPR008985:IPR000421:IPR 002345:IPR018087:IPR006103:IPR013320:IPR013781; KEGG: cai:Caci_4312 coagulation factor 5/8 type domain protein; PFAM: coagulation factor 5/8 type domain protein; glycoside hydrolase family 2 TIM barrel; SPTR: C7QJT8 Coagulation factor 5/8 type domain protein; PFAM: F5/8 type C domain; Glycosyl hydrolases family 2, TIM barrel domain; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type.
  
 
  0.733
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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