STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_7152COGs: COG2020 Putative protein-S-isoprenylcysteine methyltransferase; InterPro IPR007269; KEGG: mmi:MMAR_4222 integral membrane protein; PFAM: Isoprenylcysteine carboxyl methyltransferase; SPTR: B2HS52 Conserved integral membrane protein; PFAM: Isoprenylcysteine carboxyl methyltransferase (ICMT) family. (224 aa)    
Predicted Functional Partners:
EFH89634.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.753
Krac_7841
Homocysteine S-methyltransferase; COGs: COG0646 Methionine synthase I (cobalamin-dependent) methyltransferase domain; InterPro IPR003726:IPR003171; KEGG: tro:trd_1049 5-methyltetrahydrofolate S-homocysteine methyltransferase; PFAM: homocysteine S-methyltransferase; methylenetetrahydrofolate reductase; SPTR: B9L045 Methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase; Homocysteine S-methyltransferase.
    
  0.752
EFH90024.1
KEGG: chl:Chy400_2442 hypothetical protein; SPTR: B9LIP2 Putative uncharacterized protein; PFAM: CRISPR-associated protein (Cas_csx3); TIGRFAM: CRISPR-associated protein, Csx3 family.
    
 0.628
Krac_7572
COGs: COG4886 Leucine-rich repeat (LRR) protein; InterPro IPR020474:IPR003591:IPR001611; KEGG: npu:Npun_F6039 Miro domain-containing protein; PFAM: leucine-rich repeat protein; SPTR: B2IUT6 Miro domain protein; PFAM: Leucine Rich Repeat.
    
 0.628
Krac_3595
InterPro IPR005180; KEGG: sus:Acid_3683 hypothetical protein; SPTR: Q020J8 Putative uncharacterized protein; PFAM: Domain of unknown function DUF302.
  
     0.591
Krac_0603
InterPro IPR005180; KEGG: rlg:Rleg_0019 hypothetical protein; SPTR: C6AYA7 Putative uncharacterized protein; PFAM: Domain of unknown function DUF302.
  
     0.584
EFH90188.1
Clp domain protein; COGs: COG0501 Zn-dependent protease with chaperone function; InterPro IPR004176:IPR001915; KEGG: det:DET1423 M48 family peptidase; PFAM: Clp domain protein; peptidase M48 Ste24p; SPTR: Q3Z6L8 Peptidase, M48 family; PFAM: Peptidase family M48; Clp amino terminal domain.
    
 0.529
EFH90578.1
Ste24 endopeptidase; COGs: COG0501 Zn-dependent protease with chaperone function; InterPro IPR001915; KEGG: aba:Acid345_0572 STE24 endopeptidase; PFAM: peptidase M48 Ste24p; PRIAM: Ste24 endopeptidase; SPTR: Q1IU73 Ste24 endopeptidase; PFAM: Peptidase family M48.
    
 0.529
Krac_3903
KEGG: cai:Caci_1468 hypothetical protein; SPTR: C7Q9Z3 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF385); TIGRFAM: conserved hypothetical protein TIGR00026.
  
     0.510
Krac_5312
Hypothetical protein; InterPro IPR004378; KEGG: xce:Xcel_1326 hypothetical protein; SPTR: D1BRA2 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF385); TIGRFAM: conserved hypothetical protein TIGR00026.
  
     0.509
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.