STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_7245COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: kol:Kole_1993 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A8VQ46 Carbamate kinase; PFAM: Binding-protein-dependent transport system inner membrane component. (313 aa)    
Predicted Functional Partners:
Krac_7244
Extracellular solute-binding protein family 1; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: aoe:Clos_0572 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: A8VQ44 Putative uncharacterized protein; PFAM: Bacterial extracellular solute-binding protein.
 
  0.972
Krac_7246
Binding-protein-dependent transport systems inner membrane component; COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: bcl:ABC3123 sugar ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Q5WDA3 Sugar ABC transporter permease; PFAM: Binding-protein-dependent transport system inner membrane component.
 
  0.928
EFH90569.1
ABC transporter related protein; COGs: COG3839 ABC-type sugar transport systems ATPase components; InterProIPR008995:IPR003439:IPR017871:IPR005116:IPR 003593; KEGG: ate:Athe_1803 ABC transporter related; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; SPTR: B9MKN8 ABC transporter related; PFAM: ABC transporter; TOBE domain.
 
 0.910
Krac_0444
COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: ttr:Tter_2528 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: D1CI46 Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
  
  0.851
EFH88822.1
Binding-protein-dependent transport systems inner membrane component; COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: oih:OB0776 sugar ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C9ZBE0 Putative probable transmembrane transport protein; PFAM: Binding-protein-dependent transport system inner membrane component.
  
  0.851
EFH89836.1
Binding-protein-dependent transport systems inner membrane component; COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: ttr:Tter_2023 monosaccharide-transporting ATPase; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: D1CGQ6 Monosaccharide-transporting ATPase; PFAM: Binding-protein-dependent transport system inner membrane component.
  
  0.851
EFH89946.1
COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: ttr:Tter_2040 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: D1CGS3 Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
  
  0.851
Krac_1283
COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: tle:Tlet_2035 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A8F8V5 Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
  
  0.851
Krac_1293
COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: bcv:Bcav_0017 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: C1WI92 Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: Binding-protein-dependent transport system inner membrane component.
 
  0.851
Krac_1988
Binding-protein-dependent transport systems inner membrane component; COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515:IPR018117; KEGG: rsa:RSal33209_1017 ABC transporter sugar permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: A9WNW2 ABC transporter sugar permease; PFAM: Binding-protein-dependent transport system inner membrane component.
  
  0.851
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.